Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter edaphi |
| Strain | strain NL |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1043714 bp
Thymine Count
1035671 bp
Guanine Count
1982307 bp
Cytosine Count
1979635 bp
Genome Length
6041327 bp
Protein-coding Genes
4849 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s41 | DLM85_08075 | Not Available | Positive | 2020931 - 2022631 | 62456.8 |
| homogentisate 1,2-dioxygenase | DLM85_08080 | Not Available | Positive | 2022785 - 2023990 | 45886.4 |
| hypothetical protein | DLM85_08085 | Not Available | Positive | 2024137 - 2024682 | 20040.6 |
| hypothetical protein | DLM85_08090 | Not Available | Positive | 2024861 - 2025388 | 18967.8 |
| hydroxymethylglutaryl-coa reductase | DLM85_08095 | Not Available | Negative | 2025619 - 2027175 | 56310.0 |
| hypothetical protein | DLM85_08100 | Not Available | Negative | 2027305 - 2028084 | 28139.2 |
| hypothetical protein | DLM85_08105 | Not Available | Negative | 2028156 - 2028575 | 15148.4 |
| hypothetical protein | DLM85_08110 | Not Available | Negative | 2029136 - 2030056 | 33450.7 |
| phytanoyl-coa dioxygenase | DLM85_08115 | Not Available | Positive | 2030284 - 2031099 | 29811.0 |
| bluf domain protein | DLM85_08120 | Not Available | Positive | 2031144 - 2031569 | 15734.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
