Staphylococcus warneri strain YZ-1

Coccus

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Staphylococcaceae

Genus

Staphylococcus

Description

Staphylococcus warneri strain YZ-1 is a Gram-positive coccus primarily found in diverse habitats associated with human activity and waste management. This strain has been identified in chlorinated effluent, particularly from wastewater treatment plants (WWTP), as well as in pork meat, sewage, and sewage-impacted aquatic environments. S. warneri is notable for its presence in both treated and untreated sewage effluent, highlighting its ability to thrive in environments altered by human waste. The strain possesses a single replicon and features flagella, which may contribute to its motility in aquatic environments. The hosts for S. warneri strain YZ-1 include Homo sapiens and various Metazoa, indicating its potential role in both human-associated microbiomes and broader ecological systems. Its detection in pork meat suggests a possible link to food safety concerns, particularly in relation to enteric pathogens and the microbiological quality of meat products. From a biological and ecological standpoint, the prevalence of S. warneri in sewage-associated environments indicates its adaptability and potential resilience in polluted habitats. This adaptability may allow it to play a role in the microbial ecology of these environments, possibly influencing nutrient cycling and interactions with other microbial communities. Further research could elucidate its ecological functions and implications for wastewater management and food safety.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyStaphylococcaceae
GenusStaphylococcus
SpeciesStaphylococcus warneri
Strainstrain YZ-1

Profile

Physiology
Gram staining propertiesPositive
ShapeCoccus
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Staphylococcus warneri strain YZ-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatchlorinated effluent; effluent of a WWTP; pork meat; sewage; sewage environments; sewage-associated aquatic systems; sewage-impacted aquatic environments; skin; treated sewage effluent; WWTP effluent
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Staphylococcus warneri strain YZ-1 Scaffold18, whole genome

Gene Summary

Adenine Count

931334 bp

Thymine Count

863045 bp

Guanine Count

458288 bp

Cytosine Count

406904 bp

Genome Length

2659581 bp

Protein-coding Genes

2410 genes

Non-Coding Genes

189 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
guanylate kinaseDLY76_03245Not AvailablePositive634626 - 63524923944.6
dna-directed rna polymerase subunit omegaDLY76_03250Not AvailablePositive635249 - 6354617633.26
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabcDLY76_03255Not AvailablePositive635674 - 63687344475.1
primosomal protein n'DLY76_03260Not AvailablePositive636873 - 63928192928.5
nine proteinDLY76_03265Not AvailableNegative639346 - 6395497449.46
peptide deformylaseDLY76_03270Not AvailablePositive639759 - 64024718311.8
methionyl-trna formyltransferaseDLY76_03275Not AvailablePositive640240 - 64117233887.1
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbDLY76_03280Not AvailablePositive641169 - 64247649724.5
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnDLY76_03285Not AvailablePositive642478 - 64357242183.6
stp1/irep family pp2c-type ser/thr phosphataseDLY76_03290Not AvailablePositive643578 - 64432128427.3

Displaying genes 731 – 740 of 2599 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.