Staphylococcus warneri strain YZ-1

Coccus

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Staphylococcaceae

Genus

Staphylococcus

Description

Staphylococcus warneri strain YZ-1 is a Gram-positive coccus primarily found in diverse habitats associated with human activity and waste management. This strain has been identified in chlorinated effluent, particularly from wastewater treatment plants (WWTP), as well as in pork meat, sewage, and sewage-impacted aquatic environments. S. warneri is notable for its presence in both treated and untreated sewage effluent, highlighting its ability to thrive in environments altered by human waste. The strain possesses a single replicon and features flagella, which may contribute to its motility in aquatic environments. The hosts for S. warneri strain YZ-1 include Homo sapiens and various Metazoa, indicating its potential role in both human-associated microbiomes and broader ecological systems. Its detection in pork meat suggests a possible link to food safety concerns, particularly in relation to enteric pathogens and the microbiological quality of meat products. From a biological and ecological standpoint, the prevalence of S. warneri in sewage-associated environments indicates its adaptability and potential resilience in polluted habitats. This adaptability may allow it to play a role in the microbial ecology of these environments, possibly influencing nutrient cycling and interactions with other microbial communities. Further research could elucidate its ecological functions and implications for wastewater management and food safety.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyStaphylococcaceae
GenusStaphylococcus
SpeciesStaphylococcus warneri
Strainstrain YZ-1

Profile

Physiology
Gram staining propertiesPositive
ShapeCoccus
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Staphylococcus warneri strain YZ-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatchlorinated effluent; effluent of a WWTP; pork meat; sewage; sewage environments; sewage-associated aquatic systems; sewage-impacted aquatic environments; skin; treated sewage effluent; WWTP effluent
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Staphylococcus warneri strain YZ-1 Scaffold18, whole genome

Gene Summary

Adenine Count

931334 bp

Thymine Count

863045 bp

Guanine Count

458288 bp

Cytosine Count

406904 bp

Genome Length

2659581 bp

Protein-coding Genes

2410 genes

Non-Coding Genes

189 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionine biosynthesis plp-dependent proteinDLY76_08695Not AvailableNegative1772833 - 177393641064.9
parb/repb/spo0j family partition proteinDLY76_08705Not AvailablePositive1774641 - 177548332465.1
mechanosensitive ion channel family proteinDLY76_08710Not AvailablePositive1775631 - 177650932118.6
duf951 domain-containing proteinDLY76_08715Not AvailablePositive1776530 - 17767337790.6
redox-regulated atpase ychfDLY76_08720Not AvailablePositive1776745 - 177784240663.4
hypothetical proteinDLY76_08725Not AvailableNegative1778009 - 17782007397.84
lysozymeDLY76_08730Not AvailableNegative1778262 - 177908331260.0
30s ribosomal protein s6DLY76_08735Not AvailablePositive1779459 - 177975511691.8
single-stranded dna-binding proteinDLY76_08740Not AvailablePositive1779777 - 178029218857.4
30s ribosomal protein s18DLY76_08745Not AvailablePositive1780336 - 17805789264.5

Displaying genes 1721 – 1730 of 2599 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.