Coraliomargarita sinensis strain WN38

Gram-negativeCocci

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Opitutia

Order

Puniceicoccales

Family

Coraliomargaritaceae

Genus

Coraliomargarita

Description

Coraliomargarita sinensis strain WN38 is a Gram-negative bacterium characterized by its cocci shape. This organism possesses flagella, which are structures that may contribute to its motility in aquatic environments. Genetically, it has been identified to have a single replicon, indicating a streamlined genetic structure. The strain is cataloged under the accession QHJQ00000000.1, which provides a reference for its genomic data. The presence of a singular replicon could suggest a specific evolutionary adaptation, potentially influencing its replication and metabolic processes. Ecologically, the traits of C. sinensis strain WN38 may allow it to thrive in particular niches where motility is advantageous, such as in biofilm formation or in association with other microorganisms in marine environments. Its Gram-negative nature may also imply a resilience to certain environmental stresses, including exposure to antibiotics, which is a common characteristic of this group of bacteria. Understanding these traits can provide insights into the ecological roles of C. sinensis strain WN38 in its natural habitat, including its contributions to nutrient cycling and microbial diversity.

Taxonomy

KingdomPseudomonadati
PhylumVerrucomicrobiota
ClassOpitutia
OrderPuniceicoccales
FamilyCoraliomargaritaceae
GenusCoraliomargarita
SpeciesCoraliomargarita sinensis
Strainstrain WN38

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Coraliomargarita sinensis strain WN38
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coraliomargarita sinensis strain WN38 Scaffold36_1, whole genome

Gene Summary

Adenine Count

809618 bp

Thymine Count

807890 bp

Guanine Count

978682 bp

Cytosine Count

973465 bp

Genome Length

3569655 bp

Protein-coding Genes

2984 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDDZ13_12290Not AvailableNegative2953551 - 295512856436.4
lysr family transcriptional regulatorDDZ13_12295Not AvailablePositive2955199 - 295607733630.6
histone deacetylaseDDZ13_12300Not AvailablePositive2956389 - 295725831847.9
hypothetical proteinDDZ13_12305Not AvailablePositive2957482 - 29577008584.06
vapc toxin family pin domain ribonucleaseDDZ13_12310Not AvailablePositive2957690 - 295811216197.1
dna-directed rna polymerase subunit betaDDZ13_12320Not AvailableNegative2962561 - 2966352141403.0
50s ribosomal protein l7/l12DDZ13_12325Not AvailableNegative2966519 - 296690813292.8
50s ribosomal protein l10DDZ13_12330Not AvailableNegative2967051 - 296756918851.6
50s ribosomal protein l1DDZ13_12335Not AvailableNegative2967585 - 296828925037.9
50s ribosomal protein l11DDZ13_12340Not AvailableNegative2968341 - 296876614767.1

Displaying genes 2441 – 2450 of 3033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.