Coraliomargarita sinensis strain WN38

Gram-negativeCocci

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Opitutia

Order

Puniceicoccales

Family

Coraliomargaritaceae

Genus

Coraliomargarita

Description

Coraliomargarita sinensis strain WN38 is a Gram-negative bacterium characterized by its cocci shape. This organism possesses flagella, which are structures that may contribute to its motility in aquatic environments. Genetically, it has been identified to have a single replicon, indicating a streamlined genetic structure. The strain is cataloged under the accession QHJQ00000000.1, which provides a reference for its genomic data. The presence of a singular replicon could suggest a specific evolutionary adaptation, potentially influencing its replication and metabolic processes. Ecologically, the traits of C. sinensis strain WN38 may allow it to thrive in particular niches where motility is advantageous, such as in biofilm formation or in association with other microorganisms in marine environments. Its Gram-negative nature may also imply a resilience to certain environmental stresses, including exposure to antibiotics, which is a common characteristic of this group of bacteria. Understanding these traits can provide insights into the ecological roles of C. sinensis strain WN38 in its natural habitat, including its contributions to nutrient cycling and microbial diversity.

Taxonomy

KingdomPseudomonadati
PhylumVerrucomicrobiota
ClassOpitutia
OrderPuniceicoccales
FamilyCoraliomargaritaceae
GenusCoraliomargarita
SpeciesCoraliomargarita sinensis
Strainstrain WN38

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Coraliomargarita sinensis strain WN38
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coraliomargarita sinensis strain WN38 Scaffold36_1, whole genome

Gene Summary

Adenine Count

809618 bp

Thymine Count

807890 bp

Guanine Count

978682 bp

Cytosine Count

973465 bp

Genome Length

3569655 bp

Protein-coding Genes

2984 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
non-canonical purine ntp pyrophosphatase, rdgb/ham1 familyDDZ13_08700Not AvailablePositive2091238 - 209183120758.3
trna pseudouridine(65) synthase trucDDZ13_08705Not AvailableNegative2092045 - 209274326566.0
hypothetical proteinDDZ13_08710Not AvailablePositive2092828 - 209374533103.8
phenylalanine--trna ligase subunit alphaDDZ13_08715Not AvailablePositive2093819 - 209485939003.8
phenylalanine--trna ligase subunit betaDDZ13_08720Not AvailablePositive2095122 - 209758190329.6
carboxylate--amine ligaseDDZ13_08725Not AvailablePositive2097634 - 209908855680.8
ribosomal-protein-alanine acetyltransferaseDDZ13_08730Not AvailablePositive2099275 - 210037841508.7
asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit cDDZ13_08735Not AvailablePositive2100475 - 210076810711.5
asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit aDDZ13_08740Not AvailablePositive2100888 - 210235452071.6
gxxexxy proteinDDZ13_08745Not AvailablePositive2102423 - 210280314204.3

Displaying genes 1731 – 1740 of 3033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.