Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. WAC 04169 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1383081 bp
Thymine Count
1381792 bp
Guanine Count
3066799 bp
Cytosine Count
3107687 bp
Genome Length
8939359 bp
Protein-coding Genes
8046 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DMC61_30445 | Not Available | Positive | 6615068 - 6615943 | 30986.2 |
| marr family transcriptional regulator | DMC61_30450 | Not Available | Negative | 6616198 - 6616665 | 17627.7 |
| epoxide hydrolase | DMC61_30455 | Not Available | Positive | 6616760 - 6617842 | 40445.8 |
| gntr family transcriptional regulator | DMC61_30460 | Not Available | Negative | 6617847 - 6618551 | 25616.5 |
| phosphoglycerate dehydrogenase | DMC61_30465 | Not Available | Positive | 6618678 - 6619661 | 34566.1 |
| hydroxypyruvate isomerase | DMC61_30470 | Not Available | Positive | 6619658 - 6620455 | 28634.7 |
| hypothetical protein | DMC61_30475 | Not Available | Positive | 6620452 - 6621060 | 21094.4 |
| hrp-dependent type iii effector protein | DMC61_30480 | Not Available | Positive | 6621057 - 6622292 | 42878.3 |
| aldolase | DMC61_30485 | Not Available | Positive | 6622289 - 6622936 | 23014.4 |
| molybdenum abc transporter substrate-binding protein | DMC61_30490 | Not Available | Positive | 6622933 - 6623631 | 24160.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
