Amycolatopsis sp. WAC 04169

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis sp. WAC 04169 is a bacterial strain characterized by the presence of flagella, facilitating motility. This trait may contribute to its ecological adaptability and colonization abilities in various environments. The strain possesses a single replicon, indicating a streamlined genomic organization, which can influence its replication and genetic stability. The accession for Amycolatopsis sp. WAC 04169 is QHJI00000000.1, providing a reference for genomic information and further studies. This strain's flagellar presence suggests potential for movement towards favorable conditions or away from adverse environments, which is critical for survival and nutrient acquisition in its ecological niche. In summary, the motility conferred by flagella and the single replicon structure of Amycolatopsis sp. WAC 04169 may play significant roles in its ecological interactions and adaptability, highlighting the importance of these traits in understanding the biology and ecology of this bacterial species.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis sp. WAC 04169
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis sp. WAC 04169 AA000297-78_WAC04169, whole genome

Gene Summary

Adenine Count

1383081 bp

Thymine Count

1381792 bp

Guanine Count

3066799 bp

Cytosine Count

3107687 bp

Genome Length

8939359 bp

Protein-coding Genes

8046 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorDMC61_30445Not AvailablePositive6615068 - 661594330986.2
marr family transcriptional regulatorDMC61_30450Not AvailableNegative6616198 - 661666517627.7
epoxide hydrolaseDMC61_30455Not AvailablePositive6616760 - 661784240445.8
gntr family transcriptional regulatorDMC61_30460Not AvailableNegative6617847 - 661855125616.5
phosphoglycerate dehydrogenaseDMC61_30465Not AvailablePositive6618678 - 661966134566.1
hydroxypyruvate isomeraseDMC61_30470Not AvailablePositive6619658 - 662045528634.7
hypothetical proteinDMC61_30475Not AvailablePositive6620452 - 662106021094.4
hrp-dependent type iii effector proteinDMC61_30480Not AvailablePositive6621057 - 662229242878.3
aldolaseDMC61_30485Not AvailablePositive6622289 - 662293623014.4
molybdenum abc transporter substrate-binding proteinDMC61_30490Not AvailablePositive6622933 - 662363124160.7

Displaying genes 6021 – 6030 of 8111 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.