Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. WAC 04169 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1383081 bp
Thymine Count
1381792 bp
Guanine Count
3066799 bp
Cytosine Count
3107687 bp
Genome Length
8939359 bp
Protein-coding Genes
8046 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein biosynthesis integral membrane protein murj | DMC61_01930 | Not Available | Positive | 403635 - 405743 | 75418.6 |
| hypothetical protein | DMC61_01935 | Not Available | Positive | 405822 - 407420 | 55524.5 |
| rna polymerase sigma factor sigm | DMC61_01940 | Not Available | Positive | 407452 - 408111 | 23866.2 |
| hypothetical protein | DMC61_01945 | Not Available | Positive | 408108 - 408896 | 26672.8 |
| thioredoxin-disulfide reductase | DMC61_01950 | Not Available | Positive | 409112 - 410107 | 35559.9 |
| thioredoxin | DMC61_01955 | Not Available | Positive | 410146 - 410469 | 11530.0 |
| n-acetylmuramoyl-l-alanine amidase | DMC61_01960 | Not Available | Positive | 410721 - 411869 | 41740.8 |
| n-acetyltransferase | DMC61_01965 | Not Available | Negative | 412157 - 412801 | 23387.2 |
| plp-dependent aminotransferase family protein | DMC61_01970 | Not Available | Positive | 412996 - 414315 | 47649.1 |
| d-alanine--d-alanine ligase | DMC61_01975 | Not Available | Positive | 414351 - 415301 | 33133.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
