Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. WAC 04169 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1383081 bp
Thymine Count
1381792 bp
Guanine Count
3066799 bp
Cytosine Count
3107687 bp
Genome Length
8939359 bp
Protein-coding Genes
8046 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix-type transcriptional regulator | DMC61_17630 | Not Available | Negative | 3758458 - 3759336 | 31097.2 |
| geranylgeranyl pyrophosphate synthase | DMC61_17635 | Not Available | Positive | 3759748 - 3760848 | 39487.9 |
| phytoene desaturase | DMC61_17640 | Not Available | Positive | 3760845 - 3762362 | 53716.2 |
| phytoene synthase | DMC61_17645 | Not Available | Positive | 3762359 - 3763315 | 35308.9 |
| lycopene cyclase domain-containing protein | DMC61_17650 | Not Available | Positive | 3763315 - 3763656 | 12435.7 |
| lycopene cyclase domain-containing protein | DMC61_17655 | Not Available | Positive | 3763653 - 3763973 | 12093.0 |
| ubiquinone biosynthesis methyltransferase ubie | DMC61_17660 | Not Available | Positive | 3763970 - 3764689 | 25856.9 |
| isorenieratene synthase | DMC61_17665 | Not Available | Positive | 3764686 - 3766215 | 55435.1 |
| hypothetical protein | DMC61_17670 | Not Available | Negative | 3766310 - 3767371 | 37361.6 |
| hypothetical protein | DMC61_17675 | Not Available | Negative | 3767005 - 3770412 | 121892.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
