Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. WAC 04169 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1383081 bp
Thymine Count
1381792 bp
Guanine Count
3066799 bp
Cytosine Count
3107687 bp
Genome Length
8939359 bp
Protein-coding Genes
8046 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | DMC61_09365 | Not Available | Negative | 1936286 - 1937050 | 27838.3 |
| sugar kinase | DMC61_09370 | Not Available | Negative | 1937047 - 1938027 | 33593.0 |
| amino acid deaminase | DMC61_09375 | Not Available | Positive | 1938139 - 1939443 | 46870.7 |
| n-acyl-d-amino-acid deacylase | DMC61_09380 | Not Available | Positive | 1939477 - 1941072 | 56791.9 |
| permease | DMC61_09385 | Not Available | Positive | 1941069 - 1942457 | 47090.4 |
| 3-carboxymuconate cyclase | DMC61_09390 | Not Available | Positive | 1942485 - 1943615 | 39358.5 |
| abc transporter substrate-binding protein | DMC61_09395 | Not Available | Positive | 1943627 - 1944910 | 44385.9 |
| sugar transporter | DMC61_09400 | Not Available | Positive | 1944911 - 1945870 | 34808.8 |
| carbohydrate abc transporter permease | DMC61_09405 | Not Available | Positive | 1945861 - 1946727 | 31610.8 |
| beta-n-acetylhexosaminidase | DMC61_09410 | Not Available | Positive | 1946729 - 1948135 | 51889.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
