Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. WAC 01416 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1387364 bp
Thymine Count
1396688 bp
Guanine Count
3079633 bp
Cytosine Count
3018105 bp
Genome Length
8881790 bp
Protein-coding Genes
7983 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | DL990_34995 | Not Available | Positive | 7547596 - 7548021 | 15452.2 |
| lipase | DL990_35000 | Not Available | Positive | 7548211 - 7549443 | 42403.6 |
| arsr family transcriptional regulator | DL990_35005 | Not Available | Positive | 7549523 - 7550314 | 29747.1 |
| nad-dependent protein deacetylase of sir2 family | DL990_35010 | Not Available | Positive | 7550347 - 7551126 | 28515.0 |
| geosmin synthase | DL990_35015 | Not Available | Positive | 7551229 - 7553430 | 83205.3 |
| sugar hydrolase | DL990_35020 | Not Available | Negative | 7553509 - 7554696 | 42120.8 |
| rna polymerase subunit sigma | DL990_35025 | Not Available | Positive | 7555000 - 7555620 | 22269.9 |
| hypothetical protein | DL990_35030 | Not Available | Positive | 7555981 - 7556700 | 25420.5 |
| transcriptional regulator | DL990_35035 | Not Available | Positive | 7556732 - 7557445 | 26100.4 |
| lysr family transcriptional regulator | DL990_35040 | Not Available | Positive | 7557498 - 7558397 | 32629.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
