Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. WAC 01416 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1387364 bp
Thymine Count
1396688 bp
Guanine Count
3079633 bp
Cytosine Count
3018105 bp
Genome Length
8881790 bp
Protein-coding Genes
7983 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4440 domain-containing protein | DL990_23210 | Not Available | Negative | 4916151 - 4916576 | 15305.8 |
| tetr/acrr family transcriptional regulator | DL990_23215 | Not Available | Positive | 4916642 - 4917247 | 21360.8 |
| alpha/beta hydrolase | DL990_23220 | Not Available | Negative | 4917199 - 4918293 | 38965.4 |
| putative ripp precursor | DL990_23225 | Not Available | Positive | 4918517 - 4918624 | 3943.69 |
| lasso peptide isopeptide bond-forming cyclase | DL990_23230 | Not Available | Positive | 4918646 - 4920490 | 66089.5 |
| lasso peptide biosynthesis pqqd family chaperone | DL990_23235 | Not Available | Positive | 4920487 - 4920744 | 9182.83 |
| lasso peptide biosynthesis b2 protein | DL990_23240 | Not Available | Positive | 4920741 - 4921172 | 15390.2 |
| abc transporter atp-binding protein | DL990_23245 | Not Available | Positive | 4921169 - 4922935 | 62663.9 |
| hypothetical protein | DL990_23250 | Not Available | Positive | 4923096 - 4923719 | 22634.7 |
| acyl-coa synthetase | DL990_23255 | Not Available | Negative | 4923716 - 4925224 | 53393.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
