Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. WAC 01416 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1387364 bp
Thymine Count
1396688 bp
Guanine Count
3079633 bp
Cytosine Count
3018105 bp
Genome Length
8881790 bp
Protein-coding Genes
7983 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | DL990_10985 | Not Available | Negative | 2261604 - 2262044 | 14148.8 |
| hypothetical protein | DL990_10990 | Not Available | Positive | 2262177 - 2262545 | 13290.4 |
| rna polymerase subunit sigma | DL990_10995 | Not Available | Positive | 2262542 - 2263054 | 19060.6 |
| anti-sigma factor | DL990_11000 | Not Available | Positive | 2263051 - 2263680 | 21801.3 |
| prepilin peptidase | DL990_11005 | Not Available | Positive | 2263937 - 2264548 | 19770.5 |
| chorismate synthase | DL990_11010 | Not Available | Positive | 2264596 - 2265783 | 41653.9 |
| shikimate kinase | DL990_11015 | Not Available | Positive | 2265780 - 2266304 | 18233.9 |
| hypothetical protein | DL990_11020 | Not Available | Positive | 2266301 - 2266729 | 14563.3 |
| 3-dehydroquinate synthase | DL990_11025 | Not Available | Positive | 2266738 - 2267847 | 39056.2 |
| type ii 3-dehydroquinate dehydratase | DL990_11030 | Not Available | Positive | 2267844 - 2268275 | 15362.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
