Actinoplanes sp. ATCC 53533 AA000006-724_GDW00994

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Actinoplanes

Description

Actinoplanes sp. ATCC 53533 AA000006-724_GDW00994 is a Gram-positive bacterium characterized by a single replicon. This classification places it within a group of bacteria known for their thick peptidoglycan layers, which are indicative of their Gram-positive nature. The organism is cataloged under the accession number QHHV00000000.1, providing a reference for genetic and genomic studies. The single replicon trait suggests a streamlined genomic organization, which may contribute to the bacterium's adaptability in various environments. Actinoplanes species are often associated with soil habitats, where they play significant roles in the degradation of organic materials and the cycling of nutrients. Such ecological functions are crucial for maintaining soil health and fertility. Understanding the characteristics of Actinoplanes sp. ATCC 53533 AA000006-724_GDW00994 can provide insights into its potential applications in biotechnological processes, particularly in the production of antibiotics and other bioactive compounds. As a member of the Actinobacteria phylum, this organism could be a valuable resource for discovering new natural products, which are vital in the fight against antibiotic-resistant pathogens. The study of its genomic features may reveal further information about its metabolic capabilities and ecological roles.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusActinoplanes
SpeciesActinoplanes sp. ATCC 53533
StrainAA000006-724_GDW00994

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinoplanes sp. ATCC 53533 AA000006-724_GDW00994, whole genome

Gene Summary

Adenine Count

1927900 bp

Thymine Count

1923500 bp

Guanine Count

4716883 bp

Cytosine Count

4705243 bp

Genome Length

13273592 bp

Protein-coding Genes

11574 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate--trna ligaseDMB66_12880Not AvailableNegative2826825 - 282712110515.6
rhamnose abc transporter substrate-binding proteinDMB66_12885Not AvailableNegative2827122 - 282778522798.0
atpaseDMB66_12890Not AvailableNegative2827809 - 282879834213.8
atpaseDMB66_12895Not AvailableNegative2828791 - 282981634821.5
d-xylose abc transporter atp-binding proteinDMB66_12900Not AvailableNegative2829813 - 283133954467.1
laci family transcriptional regulatorDMB66_12905Not AvailablePositive2831426 - 283253539745.6
bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenaseDMB66_12910Not AvailablePositive2832643 - 283467370896.4
rhamnulokinaseDMB66_12915Not AvailablePositive2834718 - 283607947706.4
fe-s oxidoreductaseDMB66_12920Not AvailablePositive2836081 - 283681826390.9
(4fe-4s)-binding proteinDMB66_12925Not AvailablePositive2836815 - 283823350945.2

Displaying genes 2481 – 2490 of 11660 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.