Acuticoccus sediminis strain PTG4-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Amorphaceae

Genus

Acuticoccus

Description

Acuticoccus sediminis strain PTG4-2 is characterized by having a single replicon, which is significant for its genomic structure. The strain is cataloged under the accession number QHHQ00000000.1, indicating its availability for further research and analysis within biological databases. This bacterium is likely to be of interest due to its ecological niche, potentially contributing to sedimentary environments. The presence of a single replicon may influence its genetic stability and adaptability, which are important factors in microbial survival and competition within such habitats. Understanding the genomic characteristics of Acuticoccus sediminis strain PTG4-2 can provide insights into its metabolic capabilities and ecological roles. The study of its genome and traits may reveal how this strain interacts with its environment, participates in nutrient cycling, and contributes to the overall health of sediment ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAmorphaceae
GenusAcuticoccus
SpeciesAcuticoccus sediminis
Strainstrain PTG4-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acuticoccus sediminis strain PTG4-2 contig44, whole genome shotgun

Gene Summary

Adenine Count

1192019 bp

Thymine Count

1200259 bp

Guanine Count

2692558 bp

Cytosine Count

2678702 bp

Genome Length

7763538 bp

Protein-coding Genes

6646 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hybrid-cluster nad(p)-dependent oxidoreductaseDLJ53_24615Not AvailablePositive5596790 - 559778235079.1
n-methylproline demethylaseDLJ53_24620Not AvailablePositive5597811 - 559985674606.5
iron abc transporter permeaseDLJ53_24625Not AvailablePositive5600361 - 560210961348.9
aminopeptidaseDLJ53_24630Not AvailablePositive5602213 - 560327136462.1
3-oxoadipyl-coa thiolaseDLJ53_24635Not AvailablePositive5603340 - 560454241590.1
carbon monoxide dehydrogenaseDLJ53_24640Not AvailableNegative5604586 - 560527523183.4
arac family transcriptional regulatorDLJ53_24645Not AvailablePositive5605482 - 560635131921.7
hypothetical proteinDLJ53_24650Not AvailableNegative5606371 - 56065927484.24
abc transporter atp-binding proteinDLJ53_24655Not AvailablePositive5606848 - 560786436264.7
branched-chain amino acid abc transporter permeaseDLJ53_24660Not AvailablePositive5607864 - 560893738233.6

Displaying genes 4901 – 4910 of 6807 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.