Acuticoccus sediminis strain PTG4-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Amorphaceae

Genus

Acuticoccus

Description

Acuticoccus sediminis strain PTG4-2 is characterized by having a single replicon, which is significant for its genomic structure. The strain is cataloged under the accession number QHHQ00000000.1, indicating its availability for further research and analysis within biological databases. This bacterium is likely to be of interest due to its ecological niche, potentially contributing to sedimentary environments. The presence of a single replicon may influence its genetic stability and adaptability, which are important factors in microbial survival and competition within such habitats. Understanding the genomic characteristics of Acuticoccus sediminis strain PTG4-2 can provide insights into its metabolic capabilities and ecological roles. The study of its genome and traits may reveal how this strain interacts with its environment, participates in nutrient cycling, and contributes to the overall health of sediment ecosystems.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Alphaproteobacteria
Order	Hyphomicrobiales
Family	Amorphaceae
Genus	Acuticoccus
Species	Acuticoccus sediminis
Strain	strain PTG4-2

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Acuticoccus sediminis strain PTG4-2 contig44, whole genome shotgun

QHHQ00000000.1

Gene Summary

Adenine Count

1192019 bp

Thymine Count

1200259 bp

Guanine Count

2692558 bp

Cytosine Count

2678702 bp

Genome Length

7763538 bp

Protein-coding Genes

6646 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
fe(3+) abc transporter substrate-binding protein	DLJ53_00105	Not Available	Negative	22776 - 23723	34082.6
hypothetical protein	DLJ53_00110	Not Available	Negative	23918 - 29737	198173.0
hypothetical protein	DLJ53_00115	Not Available	Negative	29808 - 31721	68456.3
desaturase	DLJ53_00120	Not Available	Positive	31956 - 32744	29948.8
aspartate aminotransferase family protein	DLJ53_00125	Not Available	Positive	32979 - 34367	49940.7
sulfite exporter taue/safe family protein	DLJ53_00130	Not Available	Positive	34573 - 35301	24806.7
gnat family n-acetyltransferase	DLJ53_00135	Not Available	Negative	35410 - 38100	95481.2
kinase	DLJ53_00140	Not Available	Negative	38165 - 39700	54744.3
mota/tolq/exbb proton channel family protein	DLJ53_00145	Not Available	Positive	40050 - 40802	25954.8
hypothetical protein	DLJ53_00150	Not Available	Positive	40799 - 42238	49269.9

Displaying genes 191 – 200 of 6807 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.