Acuticoccus sediminis strain PTG4-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Amorphaceae

Genus

Acuticoccus

Description

Acuticoccus sediminis strain PTG4-2 is characterized by having a single replicon, which is significant for its genomic structure. The strain is cataloged under the accession number QHHQ00000000.1, indicating its availability for further research and analysis within biological databases. This bacterium is likely to be of interest due to its ecological niche, potentially contributing to sedimentary environments. The presence of a single replicon may influence its genetic stability and adaptability, which are important factors in microbial survival and competition within such habitats. Understanding the genomic characteristics of Acuticoccus sediminis strain PTG4-2 can provide insights into its metabolic capabilities and ecological roles. The study of its genome and traits may reveal how this strain interacts with its environment, participates in nutrient cycling, and contributes to the overall health of sediment ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAmorphaceae
GenusAcuticoccus
SpeciesAcuticoccus sediminis
Strainstrain PTG4-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acuticoccus sediminis strain PTG4-2 contig44, whole genome shotgun

Gene Summary

Adenine Count

1192019 bp

Thymine Count

1200259 bp

Guanine Count

2692558 bp

Cytosine Count

2678702 bp

Genome Length

7763538 bp

Protein-coding Genes

6646 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotide exchange factor grpeDLJ53_04475Not AvailableNegative1052069 - 105271923023.9
thiol reductase thioredoxinDLJ53_04480Not AvailableNegative1052729 - 105304911554.9
double-strand break repair helicase addaDLJ53_04485Not AvailableNegative1053107 - 1056460119691.0
double-strand break repair protein addbDLJ53_04490Not AvailableNegative1056507 - 1059377101228.0
mannose-1-phosphate guanylyltransferaseDLJ53_04495Not AvailableNegative1059374 - 106009025948.6
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeDLJ53_04500Not AvailableNegative1060087 - 106152051733.6
histidine kinaseDLJ53_04505Not AvailableNegative1061517 - 106376078995.2
aspartate aminotransferase family proteinDLJ53_04510Not AvailablePositive1063979 - 106531647249.7
lamb/ycsf family proteinDLJ53_04515Not AvailablePositive1065442 - 106620326315.7
allophanate hydrolaseDLJ53_04520Not AvailablePositive1066127 - 106692128510.8

Displaying genes 1041 – 1050 of 6807 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.