Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Caldicoprobacterales
Family
Caldicoprobacteraceae
Genus
Caldicoprobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Caldicoprobacterales |
| Family | Caldicoprobacteraceae |
| Genus | Caldicoprobacter |
| Species | Caldicoprobacter oshimai |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldicoprobacter oshimai
Accession NumberQGUV00000000.2
Gene Summary
Adenine Count
465034 bp
Thymine Count
456979 bp
Guanine Count
409847 bp
Cytosine Count
405606 bp
Genome Length
1737466 bp
Protein-coding Genes
1645 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | DIU64_000285 | Not Available | + | 53041 - 53850 | 30163.8 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DIU64_000290 | Not Available | + | 53925 - 55064 | 41584.7 |
| rip metalloprotease rsep | DIU64_000295 | Not Available | + | 55083 - 56108 | 37370.7 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | DIU64_000300 | Not Available | + | 56162 - 57235 | 38551.0 |
| glycosyltransferase family 2 protein | DIU64_000305 | Not Available | + | 57232 - 57870 | 23451.9 |
| polc-type dna polymerase iii | DIU64_000310 | Not Available | + | 57926 - 62227 | 162140.0 |
| ribosome maturation factor rimp | DIU64_000315 | Not Available | + | 62383 - 62844 | 17853.3 |
| transcription termination factor nusa | DIU64_000320 | Not Available | + | 62861 - 63901 | 38558.7 |
| ylxr family protein | DIU64_000325 | Not Available | + | 63931 - 64212 | 10638.1 |
| ribosomal l7ae/l30e/s12e/gadd45 family protein | DIU64_000330 | Not Available | + | 64196 - 64528 | 12251.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.