Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Caldicoprobacterales
Family
Caldicoprobacteraceae
Genus
Caldicoprobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Caldicoprobacterales |
| Family | Caldicoprobacteraceae |
| Genus | Caldicoprobacter |
| Species | Caldicoprobacter oshimai |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
465034 bp
Thymine Count
456979 bp
Guanine Count
409847 bp
Cytosine Count
405606 bp
Genome Length
1737466 bp
Protein-coding Genes
1645 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase | DIU64_003220 | Not Available | Positive | 674213 - 674671 | 17709.5 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DIU64_003225 | Not Available | Positive | 674969 - 675463 | 17472.6 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DIU64_003230 | Not Available | Positive | 675460 - 676203 | 28216.0 |
| amidophosphoribosyltransferase | DIU64_003235 | Not Available | Positive | 676274 - 677677 | 50804.3 |
| phosphoribosylformylglycinamidine cyclo-ligase | DIU64_003240 | Not Available | Positive | 677883 - 678911 | 36960.1 |
| phosphoribosylglycinamide formyltransferase | DIU64_003245 | Not Available | Positive | 678908 - 679579 | 24617.8 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | DIU64_003250 | Not Available | Positive | 679545 - 681092 | 56475.4 |
| phosphoribosylamine--glycine ligase | DIU64_003255 | Not Available | Positive | 681195 - 682460 | 46078.7 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DIU64_003260 | Not Available | Positive | 682511 - 683041 | 19891.3 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DIU64_003265 | Not Available | Negative | 683268 - 684488 | 43913.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
