Caldicoprobacter oshimai

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Caldicoprobacterales

Family

Caldicoprobacteraceae

Genus

Caldicoprobacter

Description

Caldicoprobacter oshimai is a Gram-positive, spore-forming rod that thrives in anaerobic conditions and exhibits optimal growth at a temperature of 45.0°C. This thermophilic bacterium is notable for its ability to survive in high-temperature environments, which may include geothermal habitats or hot springs, where such conditions are prevalent. The Gram-positive cell wall structure contributes to its resilience under extreme thermal conditions, allowing it to maintain structural integrity and functionality. The ability to form spores is a significant trait for Caldicoprobacter oshimai, as it facilitates survival during unfavorable environmental conditions, enabling the microbe to endure heat and nutrient depletion. Understanding the sporulation process in this organism may provide insights into its life cycle and ecological strategies. Given its anaerobic requirement, Caldicoprobacter oshimai likely plays a role in the microbial communities of thermophilic environments, contributing to biogeochemical cycles in such habitats. Its metabolic processes may involve fermentation pathways that utilize organic substrates available in these ecosystems, which can have implications for nutrient recycling and energy flow. Further studies may elucidate the specific substrates that this bacterium can utilize and its interactions within the microbial community, enhancing our understanding of thermophilic anaerobes in extreme environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderCaldicoprobacterales
FamilyCaldicoprobacteraceae
GenusCaldicoprobacter
SpeciesCaldicoprobacter oshimai
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature45
Temperature rangethermophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caldicoprobacter oshimai

Accession NumberQGUV00000000.2

Gene Summary

Adenine Count

465034 bp

Thymine Count

456979 bp

Guanine Count

409847 bp

Cytosine Count

405606 bp

Genome Length

1737466 bp

Protein-coding Genes

1645 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
4fe-4s binding proteinDIU64_000075Not Available-16488 - 1719525938.5
crp/fnr family transcriptional regulatorDIU64_000080Not Available+17329 - 1802426400.5
plp-dependent aminotransferase family proteinDIU64_000085Not Available-18140 - 1962156191.7
pyridoxal 5'-phosphate synthase lyase subunit pdxsDIU64_000090Not Available+19933 - 2081131927.8
bis-aminopropyl spermidine synthase family proteinDIU64_000095Not Available+21604 - 2267740859.8
secondary thiamine-phosphate synthase enzyme yjbqDIU64_000100Not Available+22992 - 2341415512.5
rlua family pseudouridine synthaseDIU64_000105Not Available+23539 - 2427627562.1
pyruvate kinase alpha/beta domain-containing proteinDIU64_000110Not Available+24382 - 2492419510.7
duf1614 domain-containing proteinDIU64_000115Not Available+25189 - 2588124286.4
stage ii sporulation protein pDIU64_000120Not Available+25886 - 2700741477.5

Displaying genes 41 – 50 of 1687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites