Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Caldicoprobacterales
Family
Caldicoprobacteraceae
Genus
Caldicoprobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Caldicoprobacterales |
| Family | Caldicoprobacteraceae |
| Genus | Caldicoprobacter |
| Species | Caldicoprobacter oshimai |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
465034 bp
Thymine Count
456979 bp
Guanine Count
409847 bp
Cytosine Count
405606 bp
Genome Length
1737466 bp
Protein-coding Genes
1645 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazoleglycerol-phosphate dehydratase hisb | DIU64_000985 | Not Available | Positive | 205859 - 206452 | 21627.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DIU64_000990 | Not Available | Positive | 206520 - 207239 | 26063.8 |
| imidazole glycerol phosphate synthase subunit hisf | DIU64_000995 | Not Available | Positive | 207243 - 208025 | 27427.9 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | DIU64_001000 | Not Available | Positive | 208074 - 208838 | 29164.0 |
| Trna-phe | Not Available | Not Available | Positive | 209063 - 209138 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 209296 - 209370 | Not Available |
| php domain-containing protein | DIU64_001015 | Not Available | Positive | 209621 - 210925 | 49092.6 |
| putative sporulation protein ytxc | DIU64_001020 | Not Available | Positive | 211170 - 212051 | 34861.9 |
| threonine--trna ligase | DIU64_001025 | Not Available | Positive | 212452 - 214362 | 73277.0 |
| hypothetical protein | DIU64_001030 | Not Available | Positive | 214652 - 214789 | 5047.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
