Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Caldicoprobacterales
Family
Caldicoprobacteraceae
Genus
Caldicoprobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Caldicoprobacterales |
| Family | Caldicoprobacteraceae |
| Genus | Caldicoprobacter |
| Species | Caldicoprobacter oshimai |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
465034 bp
Thymine Count
456979 bp
Guanine Count
409847 bp
Cytosine Count
405606 bp
Genome Length
1737466 bp
Protein-coding Genes
1645 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase p family n-terminal domain-containing protein | DIU64_006775 | Not Available | Negative | 1412689 - 1413150 | 17405.4 |
| type ii 3-dehydroquinate dehydratase | DIU64_006780 | Not Available | Negative | 1413147 - 1413611 | 16790.9 |
| tim barrel protein | DIU64_006785 | Not Available | Negative | 1413659 - 1414549 | 33738.4 |
| shikimate kinase | DIU64_006790 | Not Available | Negative | 1414533 - 1415081 | 20359.9 |
| late competence development comfb family protein | DIU64_006795 | Not Available | Negative | 1415053 - 1415418 | 14100.9 |
| deacetylase | DIU64_006800 | Not Available | Positive | 1415419 - 1415662 | 9334.25 |
| single-stranded dna-binding protein | DIU64_006805 | Not Available | Positive | 1415777 - 1416400 | 23536.5 |
| lysm peptidoglycan-binding domain-containing protein | DIU64_006810 | Not Available | Negative | 1416474 - 1416983 | 19043.1 |
| yerc/yecd family trpr-related protein | DIU64_006815 | Not Available | Positive | 1417298 - 1417600 | 11641.1 |
| 3'-5' exonuclease | DIU64_006820 | Not Available | Positive | 1417634 - 1420015 | 89982.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
