Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Caldicoprobacterales
Family
Caldicoprobacteraceae
Genus
Caldicoprobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Caldicoprobacterales |
| Family | Caldicoprobacteraceae |
| Genus | Caldicoprobacter |
| Species | Caldicoprobacter oshimai |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
465034 bp
Thymine Count
456979 bp
Guanine Count
409847 bp
Cytosine Count
405606 bp
Genome Length
1737466 bp
Protein-coding Genes
1645 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | DIU64_000385 | Not Available | Positive | 76670 - 79294 | 99047.7 |
| dna mismatch repair endonuclease mutl | DIU64_000390 | Not Available | Positive | 79306 - 81147 | 69201.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DIU64_000395 | Not Available | Positive | 81161 - 82111 | 36669.4 |
| rna chaperone hfq | DIU64_000400 | Not Available | Positive | 82204 - 82512 | 11278.5 |
| methionine gamma-lyase family protein | DIU64_000405 | Not Available | Positive | 82632 - 83933 | 47429.1 |
| transcriptional repressor lexa | DIU64_000410 | Not Available | Negative | 83988 - 84602 | 23292.5 |
| lysm peptidoglycan-binding domain-containing protein | DIU64_000415 | Not Available | Positive | 84789 - 85091 | 11557.3 |
| tyrosine-type recombinase/integrase | DIU64_000420 | Not Available | Negative | 85088 - 86152 | 41277.7 |
| ribonuclease hi | DIU64_000425 | Not Available | Negative | 86223 - 86717 | 18678.2 |
| pyrroline-5-carboxylate reductase | DIU64_000430 | Not Available | Negative | 86714 - 87568 | 30490.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
