Chromohalobacter israelensis strain 40a_TX

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Chromohalobacter

Description

Chromohalobacter israelensis strain 40a_TX is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This strain is part of the genus Chromohalobacter, which is known for its ability to thrive in saline environments. The specific accession number for this strain is QGTY00000000.1, which provides a reference for genetic and genomic studies. As a member of the Chromohalobacter genus, strain 40a_TX may possess adaptations that allow it to survive in high salinity conditions, which can be significant for its ecological role in environments such as salt flats and saline lakes. These adaptations often include mechanisms for osmoregulation, which enable the bacterium to maintain cellular function in environments with fluctuating salt concentrations. The biological insights gained from studying Chromohalobacter israelensis strain 40a_TX can contribute to our understanding of microbial diversity in extreme environments. Such extremophiles play crucial roles in biogeochemical cycles, including nutrient cycling and organic matter decomposition, influencing the overall health and stability of their ecosystems. By examining the traits of this strain, researchers can better understand the ecological niches occupied by halophilic bacteria and their interactions with other microbial communities in saline habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusChromohalobacter
SpeciesChromohalobacter israelensis
Strainstrain 40a_TX

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatoil sludge
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chromohalobacter israelensis strain 40a_TX Ga0227257_181, whole

Gene Summary

Adenine Count

654804 bp

Thymine Count

646281 bp

Guanine Count

1124626 bp

Cytosine Count

1173699 bp

Genome Length

3599936 bp

Protein-coding Genes

3305 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oligopeptidase aDFO74_1017Not AvailablePositive8627 - 1067877090.4
hypothetical proteinDFO74_1018Not AvailablePositive10745 - 110059746.37
cu-zn family superoxide dismutaseDFO74_1019Not AvailableNegative11103 - 1163318095.1
5,10-methylenetetrahydrofolate reductase (nad(p))DFO74_10110Not AvailableNegative11692 - 1255531782.6
cobalt-zinc-cadmium efflux system proteinDFO74_10111Not AvailableNegative12710 - 1369935677.2
drug/metabolite transporter (dmt)-like permeaseDFO74_10112Not AvailableNegative13758 - 1465431547.1
hypothetical proteinDFO74_10113Not AvailablePositive14954 - 1588333098.0
Ncrna_class:otherNot AvailableNot AvailablePositive15608 - 15791Not Available
arac family transcriptional regulatorDFO74_10114Not AvailableNegative15880 - 1660226882.3
branched-subunit amino acid transport protein azldDFO74_10115Not AvailableNegative16612 - 1693811286.1

Displaying genes 11 – 20 of 3380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

37 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001767oxalateC2O4Chemical structure of oxalateNot available
Average88.019Da
Monoisotopic87.979658488Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0001971heptanedioateC7H10O4Chemical structure of heptanedioateNot available
Average158.154Da
Monoisotopic158.059006Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da

Displaying 1–10 of 37 metabolites

Health Effects

No health effects information available for this bacterium.