Ochrobactrum sp. POC9

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Brucellaceae

Genus

Ochrobactrum

Description

Ochrobactrum sp. POC9 is characterized by a single replicon, indicating a streamlined genomic structure. This bacterium has been cataloged under the accession number QGST00000000.1, which serves as a unique identifier for its genomic data in biological databases. Ochrobactrum species are known for their environmental versatility, often found in diverse habitats such as soil and water. They are recognized for their ability to degrade various organic compounds, which suggests potential applications in bioremediation and environmental management. The presence of only one replicon in Ochrobactrum sp. POC9 may imply a simplified genetic regulation compared to other species with multiple replicons, possibly making it easier for the organism to adapt to environmental changes or stresses. The ecological role of Ochrobactrum sp. POC9 could be significant, as members of this genus are often involved in nutrient cycling and the degradation of pollutants. Understanding its genomic features and capabilities could provide insights into its environmental interactions and potential uses in biotechnology. The streamlined genomic architecture may enhance its adaptability, allowing it to thrive in various ecological niches while contributing to ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyBrucellaceae
GenusOchrobactrum
SpeciesOchrobactrum sp. POC9
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ochrobactrum sp. POC9 Ochrobactrum_sp._POC9_contig00255, whole

Gene Summary

Adenine Count

1095183 bp

Thymine Count

1106608 bp

Guanine Count

1395064 bp

Cytosine Count

1372720 bp

Genome Length

4969575 bp

Protein-coding Genes

4657 genes

Non-Coding Genes

149 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heat shock protein hspqDK867_04325Not AvailableNegative891317 - 89165513073.3
ubih/ubif family hydroxylaseDK867_04330Not AvailableNegative891748 - 89299245065.7
phosphatidylcholine synthaseDK867_04335Not AvailablePositive893308 - 89411429326.3
quinone oxidoreductaseDK867_04340Not AvailablePositive894114 - 89508834655.8
abc transporterDK867_04345Not AvailablePositive895197 - 89675655653.8
sugar abc transporter permeaseDK867_04350Not AvailablePositive896756 - 89783838843.5
abc transporter permeaseDK867_04355Not AvailablePositive897843 - 89876332184.4
bmp family abc transporter substrate-binding proteinDK867_04360Not AvailablePositive898846 - 89991338926.4
gnat family n-acetyltransferaseDK867_04365Not AvailableNegative899990 - 90045716630.1
30s ribosomal protein s12 methylthiotransferase rimoDK867_04370Not AvailableNegative900457 - 90177048820.8

Displaying genes 931 – 940 of 4806 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.