Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Xanthomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Xanthomarina |
| Species | Xanthomarina spongicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xanthomarina spongicola strain DSM 22637
Accession NumberQGGP00000000.1
Gene Summary
Adenine Count
1085414 bp
Thymine Count
1083849 bp
Guanine Count
494136 bp
Cytosine Count
491695 bp
Genome Length
3155334 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease p protein component | LX78_00234 | Not Available | + | 269766 - 270143 | 14764.2 |
| carboxyl-terminal processing protease | LX78_00235 | Not Available | + | 270150 - 271787 | 61754.3 |
| outer membrane protein ompa-like peptidoglycan-associated protein | LX78_00236 | Not Available | + | 271853 - 272704 | 32790.6 |
| elaa protein | LX78_00237 | Not Available | - | 272701 - 273144 | 17211.7 |
| ribose 5-phosphate isomerase b | LX78_00238 | Not Available | - | 273191 - 273625 | 16066.3 |
| ribonuclease r/exosome complex exonuclease dis3/rrp44 | LX78_00239 | Not Available | + | 274365 - 276602 | 85351.2 |
| putative autotransporter adhesin-like protein | LX78_00240 | Not Available | + | 276631 - 277305 | 23854.5 |
| threonine/homoserine/homoserine lactone efflux protein | LX78_00241 | Not Available | + | 277346 - 278029 | 25578.4 |
| hypothetical protein | LX78_00242 | Not Available | + | 278074 - 278424 | 13884.7 |
| Trna-cys | Not Available | Not Available | + | 278811 - 278884 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.