Pseudomonas sp. 43mfcvi1.1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 43mfcvi1.1 is characterized by having two distinct replicons, which indicates a potential for genetic diversity and adaptability within its genome. This trait is significant as it may facilitate horizontal gene transfer and the acquisition of new metabolic capabilities, which are common among Pseudomonas species. The organism is represented by two genomic accessions: QGDM00000000.1 and UETT00000000.1. These accessions provide specific sequences that can be analyzed for further understanding of its genetic makeup, functional capabilities, and ecological roles. Pseudomonas species are known for their versatility in utilizing various carbon sources and their ability to thrive in diverse environments. This adaptability allows them to play important roles in biogeochemical cycles, particularly in the degradation of organic pollutants and the cycling of nutrients in both natural and engineered ecosystems. In summary, the dual-replicon structure of Pseudomonas sp. 43mfcvi1.1, along with its genomic accessions, suggests a potential for varied metabolic functions and ecological resilience. This could allow the organism to contribute significantly to its environment, particularly in bioremediation processes and maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 43mfcvi1.1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 43mfcvi1.1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 43mfcvi1.1 Ga0073240_136, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system low calcium response chaperone lcrh/sycdATJ40_101282Not AvailablePositive319760 - 32024218418.6
type iii secretion system translocon protein (yopb/ipab/sipb family)ATJ40_101283Not AvailablePositive320245 - 32201762788.0
hypothetical proteinATJ40_101284Not AvailablePositive322039 - 32314840253.9
invasin dATJ40_101285Not AvailablePositive323162 - 32425640626.4
acyl carrier proteinATJ40_101286Not AvailablePositive324336 - 3246029824.82
transcriptional regulatorATJ40_101287Not AvailablePositive324943 - 32612443272.6
transglycosylase-like protein with slt domainATJ40_101288Not AvailablePositive326121 - 32660017998.8
type iii secretion system prgh/eprh family proteinATJ40_101289Not AvailablePositive326718 - 32789642761.1
type iii secretion system major needle protein (yscf/mxih/prgi family)ATJ40_101290Not AvailablePositive327900 - 3281639384.1
type iii secretion system major needle protein (yscf/mxih/prgi family)ATJ40_101291Not AvailablePositive328224 - 32853210966.3

Displaying genes 411 – 420 of 12003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.