Pseudomonas sp. 43mfcvi1.1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 43mfcvi1.1 is characterized by having two distinct replicons, which indicates a potential for genetic diversity and adaptability within its genome. This trait is significant as it may facilitate horizontal gene transfer and the acquisition of new metabolic capabilities, which are common among Pseudomonas species. The organism is represented by two genomic accessions: QGDM00000000.1 and UETT00000000.1. These accessions provide specific sequences that can be analyzed for further understanding of its genetic makeup, functional capabilities, and ecological roles. Pseudomonas species are known for their versatility in utilizing various carbon sources and their ability to thrive in diverse environments. This adaptability allows them to play important roles in biogeochemical cycles, particularly in the degradation of organic pollutants and the cycling of nutrients in both natural and engineered ecosystems. In summary, the dual-replicon structure of Pseudomonas sp. 43mfcvi1.1, along with its genomic accessions, suggests a potential for varied metabolic functions and ecological resilience. This could allow the organism to contribute significantly to its environment, particularly in bioremediation processes and maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 43mfcvi1.1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 43mfcvi1.1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 43mfcvi1.1 Ga0073240_136, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-gulonate 5-dehydrogenaseATJ40_104233Not AvailableNegative2166957 - 216798837203.3
d-mannonate dehydrataseATJ40_104234Not AvailableNegative2168043 - 216925445433.2
2-dehydro-3-deoxygluconokinaseATJ40_104235Not AvailableNegative2169259 - 217029938197.9
iclr family transcriptional regulatorATJ40_104236Not AvailablePositive2170415 - 217119729609.4
sucrose porinATJ40_104237Not AvailableNegative2171487 - 217304357053.4
carbohydrate abc transporter substrate-binding protein (cut1 family)ATJ40_104238Not AvailablePositive2173213 - 217448746309.1
carbohydrate abc transporter membrane protein 1 (cut1 family)ATJ40_104239Not AvailablePositive2174509 - 217547135554.1
carbohydrate abc transporter membrane protein 2 (cut1 family)ATJ40_104240Not AvailablePositive2175468 - 217631030578.4
carbohydrate abc transporter atp-binding protein (cut1 family)ATJ40_104241Not AvailablePositive2176342 - 217748741759.7
beta-fructofuranosidaseATJ40_104242Not AvailablePositive2177484 - 217898656370.7

Displaying genes 2041 – 2050 of 12003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.