Falsochrobactrum shanghaiense strain HN4

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Brucellaceae

Genus

Falsochrobactrum

Description

Falsochrobactrum shanghaiense strain HN4 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain possesses a single replicon, which is pertinent to its genetic structure and replication mechanisms. The genetic information for this strain is cataloged under the accession number QGDB00000000.1. As a member of the Falsochrobactrum genus, strain HN4 contributes to the diverse microbial community it inhabits. The Gram-negative nature of this bacterium indicates that it possesses an outer membrane containing lipopolysaccharides, which can play a role in its interactions with the environment and other microorganisms. Understanding the characteristics of Falsochrobactrum shanghaiense strain HN4 can provide insights into its ecological roles, particularly in environments where it may participate in nutrient cycling or interact with other microbial populations. The implications of its single replicon suggest a streamlined genomic organization, potentially enabling efficient replication and adaptation to its ecological niche. Overall, the traits of this strain contribute to our knowledge of microbial diversity and the functional roles of bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyBrucellaceae
GenusFalsochrobactrum
SpeciesFalsochrobactrum shanghaiense
Strainstrain HN4

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Falsochrobactrum shanghaiense strain HN4 HM4_scaffold52, whole

Gene Summary

Adenine Count

831223 bp

Thymine Count

822728 bp

Guanine Count

1088295 bp

Cytosine Count

1097170 bp

Genome Length

3839416 bp

Protein-coding Genes

3469 genes

Non-Coding Genes

212 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
vapc toxin family pin domain ribonucleaseDKP76_18055Not AvailablePositive3665106 - 366552515383.5
integraseDKP76_18060Not AvailablePositive3665515 - 366598117482.9
lysr family transcriptional regulatorDKP76_18070Not AvailablePositive3666900 - 366782034710.0
zn-dependent hydrolaseDKP76_18075Not AvailableNegative3667848 - 366909245335.5
c4-dicarboxylate abc transporter permeaseDKP76_18080Not AvailableNegative3669129 - 367040944554.2
trap transporter small permeaseDKP76_18085Not AvailableNegative3670406 - 367088217377.5
c4-dicarboxylate abc transporter substrate-binding proteinDKP76_18090Not AvailableNegative3670973 - 367197136207.5
enamine deaminase ridaDKP76_18095Not AvailableNegative3672104 - 367249614317.3
ai-2e family transporterDKP76_18100Not AvailableNegative3672693 - 367460969718.4
is66 family insertion sequence hypothetical proteinDKP76_18105Not AvailableNegative3674729 - 367519317060.4

Displaying genes 3521 – 3530 of 3681 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.