Falsochrobactrum shanghaiense strain HN4

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Brucellaceae

Genus

Falsochrobactrum

Description

Falsochrobactrum shanghaiense strain HN4 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain possesses a single replicon, which is pertinent to its genetic structure and replication mechanisms. The genetic information for this strain is cataloged under the accession number QGDB00000000.1. As a member of the Falsochrobactrum genus, strain HN4 contributes to the diverse microbial community it inhabits. The Gram-negative nature of this bacterium indicates that it possesses an outer membrane containing lipopolysaccharides, which can play a role in its interactions with the environment and other microorganisms. Understanding the characteristics of Falsochrobactrum shanghaiense strain HN4 can provide insights into its ecological roles, particularly in environments where it may participate in nutrient cycling or interact with other microbial populations. The implications of its single replicon suggest a streamlined genomic organization, potentially enabling efficient replication and adaptation to its ecological niche. Overall, the traits of this strain contribute to our knowledge of microbial diversity and the functional roles of bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyBrucellaceae
GenusFalsochrobactrum
SpeciesFalsochrobactrum shanghaiense
Strainstrain HN4

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Falsochrobactrum shanghaiense strain HN4 HM4_scaffold52, whole

Gene Summary

Adenine Count

831223 bp

Thymine Count

822728 bp

Guanine Count

1088295 bp

Cytosine Count

1097170 bp

Genome Length

3839416 bp

Protein-coding Genes

3469 genes

Non-Coding Genes

212 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
signal peptidase iDKP76_10820Not AvailableNegative2255685 - 225646728881.4
holo-acp synthaseDKP76_10825Not AvailableNegative2256534 - 225693814718.0
duf2062 domain-containing proteinDKP76_10830Not AvailableNegative2256943 - 225750620714.8
mfs transporterDKP76_10835Not AvailablePositive2257681 - 225889243159.6
oxygen-independent coproporphyrinogen iii oxidaseDKP76_10840Not AvailableNegative2259022 - 226035649173.9
crp/fnr family transcriptional regulatorDKP76_10845Not AvailableNegative2260531 - 226119624286.7
orotate phosphoribosyltransferaseDKP76_10850Not AvailableNegative2261431 - 226200920836.3
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseDKP76_10855Not AvailableNegative2262017 - 226426083761.5
dna-directed rna polymerase subunit omegaDKP76_10860Not AvailableNegative2264500 - 226490414579.9
nyn domain-containing proteinDKP76_10865Not AvailablePositive2265351 - 226592922124.1

Displaying genes 2251 – 2260 of 3681 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.