Falsochrobactrum shanghaiense strain HN4

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Brucellaceae

Genus

Falsochrobactrum

Description

Falsochrobactrum shanghaiense strain HN4 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain possesses a single replicon, which is pertinent to its genetic structure and replication mechanisms. The genetic information for this strain is cataloged under the accession number QGDB00000000.1. As a member of the Falsochrobactrum genus, strain HN4 contributes to the diverse microbial community it inhabits. The Gram-negative nature of this bacterium indicates that it possesses an outer membrane containing lipopolysaccharides, which can play a role in its interactions with the environment and other microorganisms. Understanding the characteristics of Falsochrobactrum shanghaiense strain HN4 can provide insights into its ecological roles, particularly in environments where it may participate in nutrient cycling or interact with other microbial populations. The implications of its single replicon suggest a streamlined genomic organization, potentially enabling efficient replication and adaptation to its ecological niche. Overall, the traits of this strain contribute to our knowledge of microbial diversity and the functional roles of bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyBrucellaceae
GenusFalsochrobactrum
SpeciesFalsochrobactrum shanghaiense
Strainstrain HN4

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Falsochrobactrum shanghaiense strain HN4 HM4_scaffold52, whole

Gene Summary

Adenine Count

831223 bp

Thymine Count

822728 bp

Guanine Count

1088295 bp

Cytosine Count

1097170 bp

Genome Length

3839416 bp

Protein-coding Genes

3469 genes

Non-Coding Genes

212 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
porin family proteinDKP76_08020Not AvailableNegative1689821 - 169045922112.8
hypothetical proteinDKP76_08025Not AvailableNegative1690672 - 169142127830.0
type i methionyl aminopeptidaseDKP76_08030Not AvailableNegative1691537 - 169236430103.0
dna/rna nuclease sfsaDKP76_08035Not AvailableNegative1692380 - 169307825758.7
duf2218 domain-containing proteinDKP76_08040Not AvailableNegative1693180 - 169346410802.9
Trna-gluNot AvailableNot AvailablePositive1693580 - 1693654Not Available
Trna-gluNot AvailableNot AvailablePositive1693808 - 1693882Not Available
shikimate transporterDKP76_08055Not AvailableNegative1694044 - 169552552197.9
hypothetical proteinDKP76_08060Not AvailablePositive1695863 - 169621012023.2
ll-diaminopimelate aminotransferaseDKP76_08065Not AvailablePositive1696339 - 169755944880.0

Displaying genes 1721 – 1730 of 3681 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.