Pantoea agglomerans strain CFBP13516 P1554

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea agglomerans strain CFBP13516 P1554 is a Gram-negative, rod-shaped bacterium classified as a chemoheterotroph, indicating it derives energy from organic compounds. This strain is a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic conditions, and it possesses flagella, contributing to its mobility. Optimal growth for this strain occurs at 30°C, and it is categorized as mesophilic, indicating a preference for moderate temperature environments. Pantoea agglomerans strain CFBP13516 P1554 has been associated with a range of hosts, including Homo sapiens, various plant species (Viridiplantae and Triticum aestivum), amphibians, and certain insects like Anopheles species. This broad host range suggests its ecological versatility and potential interactions within different biological communities. In terms of health implications, this strain is linked to several medical conditions in humans, including peritonitis, septic arthritis, neonatal sepsis, and various respiratory infections, such as occupational respiratory infections and farmer's lung disease. These associations highlight its potential pathogenicity and the importance of monitoring its presence in clinical settings. Overall, the diverse habitat, broad host range, and significant health effects of Pantoea agglomerans strain CFBP13516 P1554 underscore its ecological relevance and potential impact on both human health and agricultural systems, indicating a need for further research in both clinical and environmental microbiology contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea agglomerans
Strainstrain CFBP13516 P1554

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Pantoea agglomerans strain CFBP13516 P1554
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Pantoea agglomerans strain CFBP13516 P1554, whole genome shotgun

Gene Summary

Adenine Count

1132343 bp

Thymine Count

1139114 bp

Guanine Count

1387359 bp

Cytosine Count

1367400 bp

Genome Length

5026237 bp

Protein-coding Genes

4531 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinPagCFBP13516_00130Not AvailablePositive24760 - 2505610931.2
hypothetical proteinPagCFBP13516_00135Not AvailableNegative25111 - 2636747719.6
hamp domain-containing proteinPagCFBP13516_00140Not AvailablePositive26590 - 2824858467.7
catalase hpiiPagCFBP13516_00145Not AvailableNegative28316 - 3058083771.5
metal-binding protein zintPagCFBP13516_00150Not AvailablePositive30970 - 3161724217.5
Ncrna_class:otherNot AvailableNot AvailablePositive31483 - 31612Not Available
type ii toxin-antitoxin system rele/pare family toxinPagCFBP13516_00155Not AvailablePositive31758 - 3207812046.9
xre family transcriptional regulatorPagCFBP13516_00160Not AvailablePositive32071 - 3235510424.3
cytoplasmic proteinPagCFBP13516_00165Not AvailableNegative32461 - 3282613649.6
uv damage endonuclease uvsePagCFBP13516_00170Not AvailablePositive32928 - 3393838658.4

Displaying genes 81 – 90 of 4660 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PeritonitisCausesPMC3079607
Neonatal sepsisCausesPMC4560869
Septic arthritisCausesPMC4560869
SynovitisCausesPMC4560869
CholelithiasisCausesPMC4560869
Occupational respiratory infectionsCausesPMC4560869
Skin allergyCausesPMC4560869
PeritonitisCausesPMC4560869
Blood stream infectionCausesPMC4560869
Early onset neonatal sepsisCausesPMC4560869

Displaying health effects 1 – 10 of 12 in total