Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Erwiniaceae
Genus
Pantoea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Erwiniaceae |
| Genus | Pantoea |
| Species | Pantoea agglomerans |
| Strain | strain CFBP13516 P1554 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Viridiplantae, Triticum aestivum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132343 bp
Thymine Count
1139114 bp
Guanine Count
1387359 bp
Cytosine Count
1367400 bp
Genome Length
5026237 bp
Protein-coding Genes
4531 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | PagCFBP13516_17075 | Not Available | Positive | 3604078 - 3605427 | 50426.0 |
| dotu family type iv/vi secretion system protein | PagCFBP13516_17080 | Not Available | Positive | 3605424 - 3606161 | 26873.0 |
| hypothetical protein | PagCFBP13516_17085 | Not Available | Positive | 3606161 - 3607849 | 62389.0 |
| type vi secretion system tube protein hcp | PagCFBP13516_17090 | Not Available | Positive | 3607853 - 3608344 | 18757.9 |
| type vi secretion system atpase tssh | PagCFBP13516_17095 | Not Available | Positive | 3608515 - 3611184 | 98928.6 |
| type vi secretion system tip protein vgrg | PagCFBP13516_17100 | Not Available | Positive | 3611177 - 3613531 | 87151.6 |
| hypothetical protein | PagCFBP13516_17105 | Not Available | Positive | 3613620 - 3616058 | 91563.2 |
| hypothetical protein | PagCFBP13516_17110 | Not Available | Positive | 3616055 - 3616462 | 15024.6 |
| hypothetical protein | PagCFBP13516_17115 | Not Available | Positive | 3616758 - 3617585 | 30133.1 |
| hypothetical protein | PagCFBP13516_17120 | Not Available | Positive | 3617679 - 3618395 | 26413.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Peritonitis | Causes | PMC3079607 |
| Neonatal sepsis | Causes | PMC4560869 |
| Septic arthritis | Causes | PMC4560869 |
| Synovitis | Causes | PMC4560869 |
| Cholelithiasis | Causes | PMC4560869 |
| Occupational respiratory infections | Causes | PMC4560869 |
| Skin allergy | Causes | PMC4560869 |
| Peritonitis | Causes | PMC4560869 |
| Blood stream infection | Causes | PMC4560869 |
| Early onset neonatal sepsis | Causes | PMC4560869 |


