Pantoea agglomerans strain CFBP13516 P1554

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea agglomerans strain CFBP13516 P1554 is a Gram-negative, rod-shaped bacterium classified as a chemoheterotroph, indicating it derives energy from organic compounds. This strain is a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic conditions, and it possesses flagella, contributing to its mobility. Optimal growth for this strain occurs at 30°C, and it is categorized as mesophilic, indicating a preference for moderate temperature environments. Pantoea agglomerans strain CFBP13516 P1554 has been associated with a range of hosts, including Homo sapiens, various plant species (Viridiplantae and Triticum aestivum), amphibians, and certain insects like Anopheles species. This broad host range suggests its ecological versatility and potential interactions within different biological communities. In terms of health implications, this strain is linked to several medical conditions in humans, including peritonitis, septic arthritis, neonatal sepsis, and various respiratory infections, such as occupational respiratory infections and farmer's lung disease. These associations highlight its potential pathogenicity and the importance of monitoring its presence in clinical settings. Overall, the diverse habitat, broad host range, and significant health effects of Pantoea agglomerans strain CFBP13516 P1554 underscore its ecological relevance and potential impact on both human health and agricultural systems, indicating a need for further research in both clinical and environmental microbiology contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea agglomerans
Strainstrain CFBP13516 P1554

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Pantoea agglomerans strain CFBP13516 P1554
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Pantoea agglomerans strain CFBP13516 P1554, whole genome shotgun

Gene Summary

Adenine Count

1132343 bp

Thymine Count

1139114 bp

Guanine Count

1387359 bp

Cytosine Count

1367400 bp

Genome Length

5026237 bp

Protein-coding Genes

4531 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinPagCFBP13516_15430Not AvailablePositive3282774 - 32829717474.69
cellulose synthase operon protein yhjqPagCFBP13516_15435Not AvailablePositive3282971 - 328370226898.6
udp-forming cellulose synthase catalytic subunitPagCFBP13516_15440Not AvailablePositive3283699 - 328629998999.3
cellulose biosynthesis cyclic di-gmp-binding regulatory protein bcsbPagCFBP13516_15445Not AvailablePositive3286309 - 328860084839.6
cellulose biosynthesis protein bcscPagCFBP13516_15450Not AvailablePositive3288593 - 3292060125652.0
biofilm formation regulator hmspPagCFBP13516_15455Not AvailablePositive3292177 - 329418375044.7
c4-dicarboxylate transporter dctaPagCFBP13516_15460Not AvailablePositive3294409 - 329569845494.3
peptidase m16PagCFBP13516_15470Not AvailablePositive3295945 - 329743555631.9
alpha/beta hydrolasePagCFBP13516_15475Not AvailableNegative3297438 - 329831031859.1
lipid a abc transporter atp-binding protein/permease msbaPagCFBP13516_15480Not AvailablePositive3298794 - 330056064817.1

Displaying genes 3051 – 3060 of 4660 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PeritonitisCausesPMC3079607
Neonatal sepsisCausesPMC4560869
Septic arthritisCausesPMC4560869
SynovitisCausesPMC4560869
CholelithiasisCausesPMC4560869
Occupational respiratory infectionsCausesPMC4560869
Skin allergyCausesPMC4560869
PeritonitisCausesPMC4560869
Blood stream infectionCausesPMC4560869
Early onset neonatal sepsisCausesPMC4560869

Displaying health effects 1 – 10 of 12 in total