Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Erwiniaceae
Genus
Pantoea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Erwiniaceae |
| Genus | Pantoea |
| Species | Pantoea agglomerans |
| Strain | strain CFBP13516 P1554 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Viridiplantae, Triticum aestivum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132343 bp
Thymine Count
1139114 bp
Guanine Count
1387359 bp
Cytosine Count
1367400 bp
Genome Length
5026237 bp
Protein-coding Genes
4531 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PagCFBP13516_09340 | Not Available | Positive | 1961434 - 1962030 | 21324.6 |
| type vi secretion system lipoprotein tssj | PagCFBP13516_09345 | Not Available | Positive | 1962054 - 1962548 | 18273.9 |
| type vi secretion system baseplate subunit tssk | PagCFBP13516_09350 | Not Available | Positive | 1962554 - 1963897 | 50253.0 |
| dotu family type vi secretion system protein | PagCFBP13516_09355 | Not Available | Positive | 1963912 - 1965150 | 45549.0 |
| type vi secretion system membrane subunit tssm | PagCFBP13516_09360 | Not Available | Positive | 1965154 - 1968783 | 134589.0 |
| type vi secretion system-associated protein tagf | PagCFBP13516_09365 | Not Available | Positive | 1968798 - 1969514 | 26647.2 |
| type vi secretion system protein tssa | PagCFBP13516_09370 | Not Available | Positive | 1969525 - 1970544 | 37629.9 |
| type vi secretion system contractile sheath small subunit | PagCFBP13516_09375 | Not Available | Positive | 1970626 - 1971159 | 19729.6 |
| type vi secretion system contractile sheath large subunit | PagCFBP13516_09380 | Not Available | Positive | 1971156 - 1972655 | 56389.0 |
| hypothetical protein | PagCFBP13516_09385 | Not Available | Negative | 1972995 - 1973213 | 7963.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Peritonitis | Causes | PMC3079607 |
| Neonatal sepsis | Causes | PMC4560869 |
| Septic arthritis | Causes | PMC4560869 |
| Synovitis | Causes | PMC4560869 |
| Cholelithiasis | Causes | PMC4560869 |
| Occupational respiratory infections | Causes | PMC4560869 |
| Skin allergy | Causes | PMC4560869 |
| Peritonitis | Causes | PMC4560869 |
| Blood stream infection | Causes | PMC4560869 |
| Early onset neonatal sepsis | Causes | PMC4560869 |


