Pseudomonas sp. CFBP13506 P0543

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. CFBP13506, designated as P0543, is characterized by having a single replicon, which contributes to its genomic stability and adaptability in various environments. The genetic information for this strain is cataloged under the accession number QFZX00000000.1, providing a reference for researchers interested in its genomic characteristics and potential applications. Pseudomonas species are known for their metabolic versatility, allowing them to thrive in diverse ecological niches. This adaptability is a significant aspect of their role in biogeochemical cycles, particularly in soil and water ecosystems. The presence of a single replicon in Pseudomonas sp. CFBP13506 may suggest streamlined regulatory mechanisms for gene expression and replication, which could enhance its survival under fluctuating environmental conditions. Understanding the traits of Pseudomonas sp. CFBP13506 can offer insights into its ecological interactions and potential applications in bioremediation or agriculture. Its ability to utilize a broad range of substrates makes it a candidate for further research into its environmental applications. Overall, the genomic stability associated with a single replicon may underpin its ecological success and versatility, highlighting the importance of genomic traits in shaping the ecological roles of microbial organisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. CFBP13506
StrainP0543

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. CFBP13506 P0543
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. CFBP13506 P0543, whole genome shotgun sequence.

Gene Summary

Adenine Count

1175617 bp

Thymine Count

1144884 bp

Guanine Count

1773203 bp

Cytosine Count

1821130 bp

Genome Length

5914838 bp

Protein-coding Genes

5291 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4123 domain-containing proteinPspCFBP13506_27075Not AvailableNegative5826724 - 582756031896.9
type vi secretion system tip protein vgrgPspCFBP13506_27080Not AvailableNegative5827560 - 582957874878.5
diaminopimelate epimerasePspCFBP13506_27085Not AvailableNegative5829886 - 583086634083.6
mfs transporterPspCFBP13506_27090Not AvailablePositive5831216 - 583236738628.6
type iii secretion effector proteinPspCFBP13506_27095Not AvailableNegative5832377 - 583295521417.2
type iii secretion effector proteinPspCFBP13506_27100Not AvailableNegative5833485 - 58336405845.98
type iii secretion effector proteinPspCFBP13506_27105Not AvailableNegative5833928 - 583492936355.1
tonb-dependent siderophore receptorPspCFBP13506_27110Not AvailableNegative5835093 - 583749886837.7
peptide abc transporter substrate-binding proteinPspCFBP13506_27115Not AvailableNegative5837596 - 583854934917.5
rna polymerase subunit sigma-24PspCFBP13506_27120Not AvailableNegative5838579 - 583907919352.2

Displaying genes 5331 – 5340 of 5400 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.