Pseudomonas sp. CFBP13506 P0543

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. CFBP13506, designated as P0543, is characterized by having a single replicon, which contributes to its genomic stability and adaptability in various environments. The genetic information for this strain is cataloged under the accession number QFZX00000000.1, providing a reference for researchers interested in its genomic characteristics and potential applications. Pseudomonas species are known for their metabolic versatility, allowing them to thrive in diverse ecological niches. This adaptability is a significant aspect of their role in biogeochemical cycles, particularly in soil and water ecosystems. The presence of a single replicon in Pseudomonas sp. CFBP13506 may suggest streamlined regulatory mechanisms for gene expression and replication, which could enhance its survival under fluctuating environmental conditions. Understanding the traits of Pseudomonas sp. CFBP13506 can offer insights into its ecological interactions and potential applications in bioremediation or agriculture. Its ability to utilize a broad range of substrates makes it a candidate for further research into its environmental applications. Overall, the genomic stability associated with a single replicon may underpin its ecological success and versatility, highlighting the importance of genomic traits in shaping the ecological roles of microbial organisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. CFBP13506
StrainP0543

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. CFBP13506 P0543
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. CFBP13506 P0543, whole genome shotgun sequence.

Gene Summary

Adenine Count

1175617 bp

Thymine Count

1144884 bp

Guanine Count

1773203 bp

Cytosine Count

1821130 bp

Genome Length

5914838 bp

Protein-coding Genes

5291 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trk system potassium transporter trkaPspCFBP13506_12855Not AvailableNegative2712822 - 271419549735.1
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbPspCFBP13506_12860Not AvailableNegative2714218 - 271552847185.9
methionyl-trna formyltransferasePspCFBP13506_12865Not AvailableNegative2715525 - 271647833556.8
peptide deformylasePspCFBP13506_12870Not AvailableNegative2716548 - 271705419368.5
peptidoglycan-binding proteinPspCFBP13506_12875Not AvailablePositive2717190 - 271796628187.2
dna-protecting protein dpraPspCFBP13506_12880Not AvailablePositive2718030 - 271913338900.1
threonylcarbamoyl-amp synthasePspCFBP13506_12885Not AvailablePositive2719210 - 271976720642.7
quinone oxidoreductasePspCFBP13506_12890Not AvailableNegative2719812 - 272078934266.0
oxygen-dependent coproporphyrinogen oxidasePspCFBP13506_12895Not AvailablePositive2720948 - 272188035105.1
shikimate dehydrogenasePspCFBP13506_12900Not AvailablePositive2721880 - 272269829159.0

Displaying genes 2541 – 2550 of 5400 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.