Pseudomonas sp. CFBP13506 P0543

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. CFBP13506, designated as P0543, is characterized by having a single replicon, which contributes to its genomic stability and adaptability in various environments. The genetic information for this strain is cataloged under the accession number QFZX00000000.1, providing a reference for researchers interested in its genomic characteristics and potential applications. Pseudomonas species are known for their metabolic versatility, allowing them to thrive in diverse ecological niches. This adaptability is a significant aspect of their role in biogeochemical cycles, particularly in soil and water ecosystems. The presence of a single replicon in Pseudomonas sp. CFBP13506 may suggest streamlined regulatory mechanisms for gene expression and replication, which could enhance its survival under fluctuating environmental conditions. Understanding the traits of Pseudomonas sp. CFBP13506 can offer insights into its ecological interactions and potential applications in bioremediation or agriculture. Its ability to utilize a broad range of substrates makes it a candidate for further research into its environmental applications. Overall, the genomic stability associated with a single replicon may underpin its ecological success and versatility, highlighting the importance of genomic traits in shaping the ecological roles of microbial organisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. CFBP13506
StrainP0543

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. CFBP13506 P0543
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. CFBP13506 P0543, whole genome shotgun sequence.

Gene Summary

Adenine Count

1175617 bp

Thymine Count

1144884 bp

Guanine Count

1773203 bp

Cytosine Count

1821130 bp

Genome Length

5914838 bp

Protein-coding Genes

5291 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pantetheine-phosphate adenylyltransferasePspCFBP13506_10840Not AvailablePositive2288784 - 228926317836.6
ferredoxinPspCFBP13506_10845Not AvailablePositive2289366 - 22896179282.91
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyasePspCFBP13506_10850Not AvailableNegative2289735 - 229054730087.8
hdod domain-containing proteinPspCFBP13506_10855Not AvailableNegative2290569 - 229143531795.1
class i sam-dependent rrna methyltransferasePspCFBP13506_10860Not AvailablePositive2291661 - 229285743950.1
mfs transporterPspCFBP13506_10865Not AvailablePositive2293006 - 229419042200.3
duf4153 domain-containing proteinPspCFBP13506_10870Not AvailableNegative2294165 - 229589865064.2
dihydroxy-acid dehydratasePspCFBP13506_10875Not AvailablePositive2296178 - 229801965641.5
phosphorylcholine phosphatasePspCFBP13506_10880Not AvailableNegative2298208 - 229926939310.4
l-cystine transporterPspCFBP13506_10885Not AvailablePositive2299513 - 230090448384.8

Displaying genes 2151 – 2160 of 5400 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.