Pseudomonas sp. CFBP13506 P0543

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. CFBP13506, designated as P0543, is characterized by having a single replicon, which contributes to its genomic stability and adaptability in various environments. The genetic information for this strain is cataloged under the accession number QFZX00000000.1, providing a reference for researchers interested in its genomic characteristics and potential applications. Pseudomonas species are known for their metabolic versatility, allowing them to thrive in diverse ecological niches. This adaptability is a significant aspect of their role in biogeochemical cycles, particularly in soil and water ecosystems. The presence of a single replicon in Pseudomonas sp. CFBP13506 may suggest streamlined regulatory mechanisms for gene expression and replication, which could enhance its survival under fluctuating environmental conditions. Understanding the traits of Pseudomonas sp. CFBP13506 can offer insights into its ecological interactions and potential applications in bioremediation or agriculture. Its ability to utilize a broad range of substrates makes it a candidate for further research into its environmental applications. Overall, the genomic stability associated with a single replicon may underpin its ecological success and versatility, highlighting the importance of genomic traits in shaping the ecological roles of microbial organisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. CFBP13506
StrainP0543

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. CFBP13506 P0543
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. CFBP13506 P0543, whole genome shotgun sequence.

Gene Summary

Adenine Count

1175617 bp

Thymine Count

1144884 bp

Guanine Count

1773203 bp

Cytosine Count

1821130 bp

Genome Length

5914838 bp

Protein-coding Genes

5291 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flii/yscn family atpasePspCFBP13506_09480Not AvailableNegative1999139 - 200049749001.2
type iii secretion proteinPspCFBP13506_09485Not AvailableNegative2000494 - 200139032234.2
escv/yscv/hrcv family type iii secretion system export apparatus proteinPspCFBP13506_09490Not AvailableNegative2001425 - 200351876088.3
tyea family type iii secretion system gatekeeper subunitPspCFBP13506_09495Not AvailableNegative2003515 - 200457638094.2
rna polymerase sigma factorPspCFBP13506_09500Not AvailablePositive2004833 - 200538421415.3
Trna-metNot AvailableNot AvailablePositive2005711 - 2005787Not Available
rna polymerase subunit sigmaPspCFBP13506_09510Not AvailablePositive2005984 - 200650819359.6
iron dicitrate transport regulator fecrPspCFBP13506_09515Not AvailablePositive2006505 - 200744934113.9
tonb-dependent siderophore receptorPspCFBP13506_09520Not AvailablePositive2007543 - 200997288436.9
phzf family phenazine biosynthesis proteinPspCFBP13506_09525Not AvailablePositive2010156 - 201093528486.8

Displaying genes 1881 – 1890 of 5400 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.