Microbispora triticiradicis strain NEAU-HRDPA2-9 C4071

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Streptosporangiaceae

Genus

Microbispora

Description

Microbispora triticiradicis strain NEAU-HRDPA2-9 C4071 is characterized by having a single replicon, indicating a streamlined genomic structure. This strain is cataloged under the accession number QFZU00000000.2, which serves as a reference for researchers seeking genomic information about this specific microorganism. The designation of the strain as Microbispora triticiradicis highlights its association with wheat roots, suggesting its ecological role in plant-microbe interactions. This relationship may be significant for understanding how this bacterium could influence plant health and growth, particularly in agricultural settings. The presence of only one replicon suggests that this strain may have a reduced genomic complexity, which can be advantageous for adaptability in specific environments, such as those found in association with plant roots. The genomic simplicity may allow for efficient regulation of genes that are crucial for survival in rhizosphere conditions. Overall, the characteristics of Microbispora triticiradicis strain NEAU-HRDPA2-9 C4071, particularly its single replicon structure and its association with wheat, provide insights into its potential roles in agriculture and soil health. Understanding the mechanisms by which this strain interacts with plant roots could lead to applications in sustainable farming practices, enhancing crop resilience and productivity.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyStreptosporangiaceae
GenusMicrobispora
SpeciesMicrobispora triticiradicis
Strainstrain NEAU-HRDPA2-9 C4071

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbispora triticiradicis strain NEAU-HRDPA2-9 C4071, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6869 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter atp-binding proteinDI270_018770Not AvailableNegative4243604 - 424513956258.1
sugar abc transporter substrate-binding proteinDI270_018775Not AvailableNegative4245174 - 424626838792.1
laci family transcriptional regulatorDI270_018780Not AvailableNegative4246370 - 424664810275.3
hypothetical proteinDI270_018785Not AvailableNegative4246649 - 424692810779.3
penicillin-binding protein 2DI270_018790Not AvailablePositive4247039 - 424872759967.9
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseDI270_018795Not AvailablePositive4248841 - 425046355152.5
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseDI270_018800Not AvailablePositive4250605 - 425197246190.4
phospho-n-acetylmuramoyl-pentapeptide- transferaseDI270_018805Not AvailablePositive4251969 - 425304538210.7
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseDI270_018810Not AvailablePositive4253027 - 425440347307.2
putative lipid ii flippase ftswDI270_018815Not AvailablePositive4254415 - 425590853433.1

Displaying genes 3601 – 3610 of 6931 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.