Candidatus Nitrotoga sp. CP45

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Gallionellaceae

Genus

Candidatus Nitrotoga

Description

Candidatus Nitrotoga sp. CP45 is characterized by a single replicon and is cataloged under the accession number QFXJ00000000.1. This organism is part of the Nitrotoga genus, which is known for its role in the nitrogen cycle, particularly in the oxidation of ammonia to nitrite, a process vital for nitrogen removal in various ecosystems. The presence of only one replicon suggests a streamlined genome structure, which can be indicative of specialized metabolic capabilities or adaptations to specific environmental conditions. The single replicon may also reflect a potential for efficient replication and maintenance, allowing Candidatus Nitrotoga sp. CP45 to thrive in its habitat. In terms of its ecological role, members of the Nitrotoga genus, including Candidatus Nitrotoga sp. CP45, play a significant part in the biogeochemical cycling of nitrogen, especially in environments where ammonium is prevalent. Their activity can influence nutrient availability and overall ecosystem health by facilitating the conversion of ammonia into forms that can be further utilized by other microorganisms or plants. Understanding the characteristics of Candidatus Nitrotoga sp. CP45 may provide insights into its ecological niche and functional role within its environment, particularly in relation to nitrogen cycling processes. This highlights the importance of studying such microorganisms in the context of environmental management and ecosystem sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyGallionellaceae
GenusCandidatus Nitrotoga
SpeciesCandidatus Nitrotoga sp. CP45
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Nitrotoga sp. CP45


Gene Summary

Adenine Count

728019 bp

Thymine Count

713852 bp

Guanine Count

672508 bp

Cytosine Count

701858 bp

Genome Length

2816237 bp

Protein-coding Genes

2665 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zn-dependent protease (includes spoivfb)DID89_2727545945Not AvailablePositive6077 - 672423689.2
tryptophanyl-trna synthetaseDID89_2727545946Not AvailablePositive6735 - 793745639.8
condensin subunit scpaDID89_2727545947Not AvailablePositive7983 - 879531044.1
condensin subunit scpbDID89_2727545948Not AvailablePositive8761 - 935121769.2
rna methyltransferase, trmh familyDID89_2727545949Not AvailablePositive9373 - 1015227949.9
membrane-anchored ribosome-binding protein, elab/yqjd/duf883 familyDID89_2727545950Not AvailablePositive10343 - 1067211605.0
protein of unknown function (duf748)DID89_2727545951Not AvailablePositive10913 - 14710137875.0
Ncrna_class:autocatalytically_spliced_intronNot AvailableNot AvailablePositive11803 - 11876Not Available
Ncrna_class:otherNot AvailableNot AvailablePositive13482 - 13882Not Available
hnh endonucleaseDID89_2727545952Not AvailableNegative14802 - 1529618412.6

Displaying genes 11 – 20 of 2714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.