Candidatus Nitrotoga sp. CP45

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Gallionellaceae

Genus

Candidatus Nitrotoga

Description

Candidatus Nitrotoga sp. CP45 is characterized by a single replicon and is cataloged under the accession number QFXJ00000000.1. This organism is part of the Nitrotoga genus, which is known for its role in the nitrogen cycle, particularly in the oxidation of ammonia to nitrite, a process vital for nitrogen removal in various ecosystems. The presence of only one replicon suggests a streamlined genome structure, which can be indicative of specialized metabolic capabilities or adaptations to specific environmental conditions. The single replicon may also reflect a potential for efficient replication and maintenance, allowing Candidatus Nitrotoga sp. CP45 to thrive in its habitat. In terms of its ecological role, members of the Nitrotoga genus, including Candidatus Nitrotoga sp. CP45, play a significant part in the biogeochemical cycling of nitrogen, especially in environments where ammonium is prevalent. Their activity can influence nutrient availability and overall ecosystem health by facilitating the conversion of ammonia into forms that can be further utilized by other microorganisms or plants. Understanding the characteristics of Candidatus Nitrotoga sp. CP45 may provide insights into its ecological niche and functional role within its environment, particularly in relation to nitrogen cycling processes. This highlights the importance of studying such microorganisms in the context of environmental management and ecosystem sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyGallionellaceae
GenusCandidatus Nitrotoga
SpeciesCandidatus Nitrotoga sp. CP45
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Candidatus Nitrotoga sp. CP45 CP45_NXR_Contig, whole genome

Gene Summary

Adenine Count

728019 bp

Thymine Count

713852 bp

Guanine Count

672508 bp

Cytosine Count

701858 bp

Genome Length

2816237 bp

Protein-coding Genes

2665 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rod shape-determining protein mrebDID89_2727546927Not AvailablePositive1039358 - 104040137137.0
rod shape-determining protein mrecDID89_2727546928Not AvailablePositive1040552 - 104146334172.6
rod shape-determining protein mredDID89_2727546929Not AvailablePositive1041460 - 104197819599.3
peptidoglycan glycosyltransferase /cell elongation-specific peptidoglycan d,d-transpeptidaseDID89_2727546930Not AvailablePositive1041975 - 104387670612.1
rod shape determining protein rodaDID89_2727546931Not AvailablePositive1043869 - 104496640456.2
multidrug efflux pump subunit acrbDID89_2727546932Not AvailablePositive1045233 - 1048430115194.0
rnd family efflux transporter, mfp subunitDID89_2727546933Not AvailablePositive1048423 - 104965244673.9
efflux transporter, outer membrane factor (omf) lipoprotein, nodt familyDID89_2727546934Not AvailablePositive1049649 - 105107952157.2
rare lipoprotein aDID89_2727546935Not AvailablePositive1051403 - 105234734156.8
hypothetical proteinDID89_2727546936Not AvailableNegative1052556 - 10528139650.93

Displaying genes 1001 – 1010 of 2714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.