Vibrio albus strain E4404

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio albus strain E4404 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number QFWT00000000.1, which serves as a reference for its genomic data. Vibrio albus is a member of the Vibrio genus, which is known for its presence in marine environments. The ecological role of Vibrio species often includes participation in nutrient cycling and interactions with both macro and microorganisms. The single replicon characteristic may suggest a particular evolutionary strategy that allows V. albus to thrive in specific ecological niches or under varying environmental conditions. This trait can influence the organism’s metabolic capabilities and its interactions within microbial communities. Understanding the genomic features of Vibrio albus strain E4404 can provide insights into its potential applications in biotechnology or environmental microbiology, particularly in marine ecosystems. The simplicity of having one replicon might facilitate genetic studies aimed at exploring the strain's role in biogeochemical cycles or its interactions with marine life. Overall, the traits associated with Vibrio albus strain E4404 highlight its significance within the broader ecological context of marine microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio albus
Strainstrain E4404

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio albus strain E4404
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio albus strain E4404 contig37_1, whole genome shotgun

Gene Summary

Adenine Count

1157557 bp

Thymine Count

1142441 bp

Guanine Count

957465 bp

Cytosine Count

1007833 bp

Genome Length

4265296 bp

Protein-coding Genes

3666 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDI392_04840Not AvailablePositive1065510 - 106697053794.5
duf2066 domain-containing proteinDI392_04845Not AvailableNegative1067040 - 106831746140.0
uracil permeaseDI392_04850Not AvailablePositive1068490 - 106973742883.2
uracil phosphoribosyltransferaseDI392_04855Not AvailableNegative1069864 - 107049022613.7
phosphoribosylformylglycinamidine cyclo-ligaseDI392_04860Not AvailablePositive1070664 - 107170436622.7
phosphoribosylglycinamide formyltransferaseDI392_04865Not AvailablePositive1071718 - 107237423737.2
class ii glutamine amidotransferaseDI392_04870Not AvailableNegative1072503 - 107327329178.7
d-sedoheptulose 7-phosphate isomeraseDI392_04875Not AvailableNegative1073307 - 107389121141.2
tigr03503 family proteinDI392_04880Not AvailableNegative1073983 - 107523647233.3
dna polymerase iii subunit epsilonDI392_04885Not AvailableNegative1075311 - 107607228248.4

Displaying genes 971 – 980 of 3788 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.