Vibrio albus strain E4404

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio albus strain E4404 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number QFWT00000000.1, which serves as a reference for its genomic data. Vibrio albus is a member of the Vibrio genus, which is known for its presence in marine environments. The ecological role of Vibrio species often includes participation in nutrient cycling and interactions with both macro and microorganisms. The single replicon characteristic may suggest a particular evolutionary strategy that allows V. albus to thrive in specific ecological niches or under varying environmental conditions. This trait can influence the organism’s metabolic capabilities and its interactions within microbial communities. Understanding the genomic features of Vibrio albus strain E4404 can provide insights into its potential applications in biotechnology or environmental microbiology, particularly in marine ecosystems. The simplicity of having one replicon might facilitate genetic studies aimed at exploring the strain's role in biogeochemical cycles or its interactions with marine life. Overall, the traits associated with Vibrio albus strain E4404 highlight its significance within the broader ecological context of marine microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio albus
Strainstrain E4404

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio albus strain E4404
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio albus strain E4404 contig37_1, whole genome shotgun

Gene Summary

Adenine Count

1157557 bp

Thymine Count

1142441 bp

Guanine Count

957465 bp

Cytosine Count

1007833 bp

Genome Length

4265296 bp

Protein-coding Genes

3666 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylaseDI392_02570Not AvailableNegative566740 - 56789743058.9
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabDI392_02575Not AvailablePositive568197 - 56961853640.1
nucleoside triphosphate hydrolaseDI392_02580Not AvailablePositive569679 - 57077040911.0
rrna maturation rnase ybeyDI392_02585Not AvailablePositive570770 - 57125818582.7
magnesium/cobalt transporter corcDI392_02590Not AvailablePositive571313 - 57220633774.6
apolipoprotein n-acyltransferaseDI392_02595Not AvailablePositive572267 - 57376955552.1
zinc ribbon-containing proteinDI392_02600Not AvailableNegative574074 - 57454417771.0
leucine--trna ligaseDI392_02605Not AvailablePositive574666 - 57723996945.7
luciferaseDI392_02610Not AvailablePositive577396 - 57794720483.5
dna polymerase iii subunit deltaDI392_02615Not AvailablePositive577965 - 57899639357.1

Displaying genes 521 – 530 of 3788 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.