Vibrio albus strain E4404

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio albus strain E4404 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number QFWT00000000.1, which serves as a reference for its genomic data. Vibrio albus is a member of the Vibrio genus, which is known for its presence in marine environments. The ecological role of Vibrio species often includes participation in nutrient cycling and interactions with both macro and microorganisms. The single replicon characteristic may suggest a particular evolutionary strategy that allows V. albus to thrive in specific ecological niches or under varying environmental conditions. This trait can influence the organism’s metabolic capabilities and its interactions within microbial communities. Understanding the genomic features of Vibrio albus strain E4404 can provide insights into its potential applications in biotechnology or environmental microbiology, particularly in marine ecosystems. The simplicity of having one replicon might facilitate genetic studies aimed at exploring the strain's role in biogeochemical cycles or its interactions with marine life. Overall, the traits associated with Vibrio albus strain E4404 highlight its significance within the broader ecological context of marine microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio albus
Strainstrain E4404

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio albus strain E4404
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio albus strain E4404 contig37_1, whole genome shotgun

Gene Summary

Adenine Count

1157557 bp

Thymine Count

1142441 bp

Guanine Count

957465 bp

Cytosine Count

1007833 bp

Genome Length

4265296 bp

Protein-coding Genes

3666 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDI392_01435Not AvailableNegative331038 - 33145415313.9
hypothetical proteinDI392_01440Not AvailableNegative331641 - 3318869812.38
carbonic anhydraseDI392_01445Not AvailableNegative332345 - 33306426059.8
fucose 4-o-acetylaseDI392_01450Not AvailableNegative333228 - 33425938614.5
1,4-beta-d-glucan glucohydrolaseDI392_01455Not AvailablePositive334632 - 33723596151.6
c4-dicarboxylate abc transporterDI392_01460Not AvailablePositive337343 - 33832036518.7
ggdef-domain containing proteinDI392_01465Not AvailableNegative338370 - 34037976230.4
orotidine-5'-phosphate decarboxylaseDI392_01470Not AvailableNegative340630 - 34132224911.2
lipopolysaccharide assembly protein lapbDI392_01475Not AvailableNegative341393 - 34256244253.2
duf1049 domain-containing proteinDI392_01480Not AvailableNegative342590 - 34287110328.1

Displaying genes 291 – 300 of 3788 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.