Vibrio albus strain E4404

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio albus strain E4404 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number QFWT00000000.1, which serves as a reference for its genomic data. Vibrio albus is a member of the Vibrio genus, which is known for its presence in marine environments. The ecological role of Vibrio species often includes participation in nutrient cycling and interactions with both macro and microorganisms. The single replicon characteristic may suggest a particular evolutionary strategy that allows V. albus to thrive in specific ecological niches or under varying environmental conditions. This trait can influence the organism’s metabolic capabilities and its interactions within microbial communities. Understanding the genomic features of Vibrio albus strain E4404 can provide insights into its potential applications in biotechnology or environmental microbiology, particularly in marine ecosystems. The simplicity of having one replicon might facilitate genetic studies aimed at exploring the strain's role in biogeochemical cycles or its interactions with marine life. Overall, the traits associated with Vibrio albus strain E4404 highlight its significance within the broader ecological context of marine microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio albus
Strainstrain E4404

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio albus strain E4404
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio albus strain E4404 contig37_1, whole genome shotgun

Gene Summary

Adenine Count

1157557 bp

Thymine Count

1142441 bp

Guanine Count

957465 bp

Cytosine Count

1007833 bp

Genome Length

4265296 bp

Protein-coding Genes

3666 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide chain release factor 2DI392_05605Not AvailableNegative1237613 - 123871141223.0
single-stranded-dna-specific exonuclease recjDI392_05610Not AvailableNegative1238895 - 124063463476.0
thiol:disulfide interchange proteinDI392_05615Not AvailableNegative1240921 - 124166127158.3
site-specific tyrosine recombinase xerdDI392_05620Not AvailableNegative1241714 - 124261034391.4
serine proteaseDI392_05625Not AvailableNegative1242630 - 124486482635.7
penicillin-binding protein 1bDI392_05630Not AvailableNegative1244987 - 124739290327.3
atp-dependent helicase hrpbDI392_05635Not AvailableNegative1247413 - 124994793100.3
dna/rna nuclease sfsaDI392_05640Not AvailablePositive1249997 - 125072826907.8
rna polymerase-binding protein dksaDI392_05645Not AvailablePositive1250867 - 125131317254.6
trna glutamyl-q(34) synthetase gluqrsDI392_05650Not AvailablePositive1251405 - 125229533304.6

Displaying genes 1121 – 1130 of 3788 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.