Litorivita pollutaquae strain FSX-11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Litorivita

Description

Litorivita pollutaquae strain FSX-11 is a notable microorganism characterized by having a single replicon. This trait can influence the organism's genomic stability and replication efficiency, which are critical factors in its adaptability and survival in various environments. The strain is cataloged under the accession number QFVT00000000.1, which provides a reference point for researchers seeking detailed genomic information and further insights into its biological characteristics. The single replicon suggests a streamlined genomic architecture, potentially indicating a more efficient replication process compared to organisms with multiple replicons. Understanding the genomic structure of Litorivita pollutaquae strain FSX-11 can shed light on its ecological roles and interactions within its habitat. The presence of a single replicon may confer certain advantages, such as a reduced metabolic burden and a focused regulatory system, allowing it to thrive in nutrient-variable environments. This trait may also suggest that Litorivita pollutaquae strain FSX-11 possesses a specialized niche, potentially contributing to biogeochemical cycling in its ecosystem. Thus, the genomic characteristics of this strain not only inform us about its biological capabilities but also provide insights into its ecological functions, highlighting the importance of microbial diversity in maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusLitorivita
SpeciesLitorivita pollutaquae
Strainstrain FSX-11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Litorivita pollutaquae strain FSX-11 Scaffold28_1, whole genome

Gene Summary

Adenine Count

713487 bp

Thymine Count

699833 bp

Guanine Count

987754 bp

Cytosine Count

1020449 bp

Genome Length

3421523 bp

Protein-coding Genes

3154 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lps export abc transporter permease lptgDI396_00205Not AvailablePositive38962 - 4005639464.4
lps-assembly protein lptdDI396_00210Not AvailablePositive40056 - 4230882887.1
peptidylprolyl isomeraseDI396_00215Not AvailablePositive42407 - 4363043965.8
4-hydroxythreonine-4-phosphate dehydrogenase pdxaDI396_00220Not AvailablePositive43627 - 4462234125.3
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferaseDI396_00225Not AvailablePositive44703 - 4553930478.2
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive45095 - 45193Not Available
duf4167 domain-containing proteinDI396_00230Not AvailableNegative45801 - 4650226178.7
peptide chain release factor n(5)-glutamine methyltransferaseDI396_00235Not AvailableNegative46786 - 4759228830.3
peptide chain release factor 1DI396_00240Not AvailableNegative47666 - 4871538764.8
duf1499 domain-containing proteinDI396_00245Not AvailableNegative48894 - 4930114975.4

Displaying genes 81 – 90 of 3230 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.