Litorivita pollutaquae strain FSX-11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Litorivita

Description

Litorivita pollutaquae strain FSX-11 is a notable microorganism characterized by having a single replicon. This trait can influence the organism's genomic stability and replication efficiency, which are critical factors in its adaptability and survival in various environments. The strain is cataloged under the accession number QFVT00000000.1, which provides a reference point for researchers seeking detailed genomic information and further insights into its biological characteristics. The single replicon suggests a streamlined genomic architecture, potentially indicating a more efficient replication process compared to organisms with multiple replicons. Understanding the genomic structure of Litorivita pollutaquae strain FSX-11 can shed light on its ecological roles and interactions within its habitat. The presence of a single replicon may confer certain advantages, such as a reduced metabolic burden and a focused regulatory system, allowing it to thrive in nutrient-variable environments. This trait may also suggest that Litorivita pollutaquae strain FSX-11 possesses a specialized niche, potentially contributing to biogeochemical cycling in its ecosystem. Thus, the genomic characteristics of this strain not only inform us about its biological capabilities but also provide insights into its ecological functions, highlighting the importance of microbial diversity in maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusLitorivita
SpeciesLitorivita pollutaquae
Strainstrain FSX-11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Litorivita pollutaquae strain FSX-11 Scaffold28_1, whole genome

Gene Summary

Adenine Count

713487 bp

Thymine Count

699833 bp

Guanine Count

987754 bp

Cytosine Count

1020449 bp

Genome Length

3421523 bp

Protein-coding Genes

3154 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trypsinDI396_11700Not AvailableNegative2462334 - 246314629173.8
glycolate oxidase iron-sulfur subunitDI396_11705Not AvailableNegative2463209 - 246453147624.0
hypothetical proteinDI396_11710Not AvailableNegative2464534 - 246487211985.3
2-hydroxy-acid oxidaseDI396_11715Not AvailableNegative2464872 - 246599638730.6
fad-binding oxidoreductaseDI396_11720Not AvailableNegative2465996 - 246742950624.1
duf599 domain-containing proteinDI396_11725Not AvailablePositive2467594 - 246833427315.4
hypothetical proteinDI396_11730Not AvailablePositive2468422 - 246876012217.2
hypothetical proteinDI396_11735Not AvailableNegative2468767 - 247085774796.3
lyttr family transcriptional regulatorDI396_11740Not AvailableNegative2470866 - 247364697781.6
duf58 domain-containing proteinDI396_11745Not AvailableNegative2473643 - 247450332019.3

Displaying genes 2321 – 2330 of 3230 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.