Litorivita pollutaquae strain FSX-11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Litorivita

Description

Litorivita pollutaquae strain FSX-11 is a notable microorganism characterized by having a single replicon. This trait can influence the organism's genomic stability and replication efficiency, which are critical factors in its adaptability and survival in various environments. The strain is cataloged under the accession number QFVT00000000.1, which provides a reference point for researchers seeking detailed genomic information and further insights into its biological characteristics. The single replicon suggests a streamlined genomic architecture, potentially indicating a more efficient replication process compared to organisms with multiple replicons. Understanding the genomic structure of Litorivita pollutaquae strain FSX-11 can shed light on its ecological roles and interactions within its habitat. The presence of a single replicon may confer certain advantages, such as a reduced metabolic burden and a focused regulatory system, allowing it to thrive in nutrient-variable environments. This trait may also suggest that Litorivita pollutaquae strain FSX-11 possesses a specialized niche, potentially contributing to biogeochemical cycling in its ecosystem. Thus, the genomic characteristics of this strain not only inform us about its biological capabilities but also provide insights into its ecological functions, highlighting the importance of microbial diversity in maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusLitorivita
SpeciesLitorivita pollutaquae
Strainstrain FSX-11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Litorivita pollutaquae strain FSX-11 Scaffold28_1, whole genome

Gene Summary

Adenine Count

713487 bp

Thymine Count

699833 bp

Guanine Count

987754 bp

Cytosine Count

1020449 bp

Genome Length

3421523 bp

Protein-coding Genes

3154 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
large conductance mechanosensitive channel protein msclDI396_10940Not AvailableNegative2309000 - 230941614694.2
glutathione s-transferaseDI396_10945Not AvailablePositive2309566 - 231027026100.4
hypothetical proteinDI396_10950Not AvailablePositive2310419 - 231139636792.1
malonyl-coa synthaseDI396_10955Not AvailablePositive2311470 - 231298154273.3
aspartate aminotransferase family proteinDI396_10960Not AvailableNegative2313039 - 231443650253.0
gntr family transcriptional regulatorDI396_10965Not AvailableNegative2314537 - 231524725415.6
spermidine/putrescine abc transporter substrate-binding protein potfDI396_10970Not AvailablePositive2315406 - 231649139706.8
polyamine abc transporter atp-binding proteinDI396_10975Not AvailablePositive2316613 - 231773741598.1
putrescine/spermidine abc transporter permeaseDI396_10980Not AvailablePositive2317740 - 231863033374.5
putrescine abc transporter permease potiDI396_10985Not AvailablePositive2318627 - 231944229273.5

Displaying genes 2171 – 2180 of 3230 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.