Litorivita pollutaquae strain FSX-11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Litorivita

Description

Litorivita pollutaquae strain FSX-11 is a notable microorganism characterized by having a single replicon. This trait can influence the organism's genomic stability and replication efficiency, which are critical factors in its adaptability and survival in various environments. The strain is cataloged under the accession number QFVT00000000.1, which provides a reference point for researchers seeking detailed genomic information and further insights into its biological characteristics. The single replicon suggests a streamlined genomic architecture, potentially indicating a more efficient replication process compared to organisms with multiple replicons. Understanding the genomic structure of Litorivita pollutaquae strain FSX-11 can shed light on its ecological roles and interactions within its habitat. The presence of a single replicon may confer certain advantages, such as a reduced metabolic burden and a focused regulatory system, allowing it to thrive in nutrient-variable environments. This trait may also suggest that Litorivita pollutaquae strain FSX-11 possesses a specialized niche, potentially contributing to biogeochemical cycling in its ecosystem. Thus, the genomic characteristics of this strain not only inform us about its biological capabilities but also provide insights into its ecological functions, highlighting the importance of microbial diversity in maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusLitorivita
SpeciesLitorivita pollutaquae
Strainstrain FSX-11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Litorivita pollutaquae strain FSX-11 Scaffold28_1, whole genome

Gene Summary

Adenine Count

713487 bp

Thymine Count

699833 bp

Guanine Count

987754 bp

Cytosine Count

1020449 bp

Genome Length

3421523 bp

Protein-coding Genes

3154 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDI396_10680Not AvailableNegative2255239 - 225587422003.1
kpsf/gutq family sugar-phosphate isomeraseDI396_10685Not AvailableNegative2255878 - 225686434388.7
ribonuclease dDI396_10690Not AvailableNegative2256857 - 225747122929.6
hypothetical proteinDI396_10695Not AvailableNegative2257874 - 225896238698.7
2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferaseDI396_10700Not AvailableNegative2259015 - 226062556962.3
succinyl-diaminopimelate desuccinylaseDI396_10705Not AvailablePositive2260918 - 226211442140.8
hypothetical proteinDI396_10710Not AvailablePositive2262150 - 226274021070.7
ribonuclease rDI396_10715Not AvailablePositive2262772 - 226506083298.4
lytic murein transglycosylaseDI396_10720Not AvailablePositive2265233 - 226665451096.7
rna pyrophosphohydrolaseDI396_10725Not AvailableNegative2266661 - 226714318268.6

Displaying genes 2121 – 2130 of 3230 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.