Litorivita pollutaquae strain FSX-11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Litorivita

Description

Litorivita pollutaquae strain FSX-11 is a notable microorganism characterized by having a single replicon. This trait can influence the organism's genomic stability and replication efficiency, which are critical factors in its adaptability and survival in various environments. The strain is cataloged under the accession number QFVT00000000.1, which provides a reference point for researchers seeking detailed genomic information and further insights into its biological characteristics. The single replicon suggests a streamlined genomic architecture, potentially indicating a more efficient replication process compared to organisms with multiple replicons. Understanding the genomic structure of Litorivita pollutaquae strain FSX-11 can shed light on its ecological roles and interactions within its habitat. The presence of a single replicon may confer certain advantages, such as a reduced metabolic burden and a focused regulatory system, allowing it to thrive in nutrient-variable environments. This trait may also suggest that Litorivita pollutaquae strain FSX-11 possesses a specialized niche, potentially contributing to biogeochemical cycling in its ecosystem. Thus, the genomic characteristics of this strain not only inform us about its biological capabilities but also provide insights into its ecological functions, highlighting the importance of microbial diversity in maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusLitorivita
SpeciesLitorivita pollutaquae
Strainstrain FSX-11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Litorivita pollutaquae strain FSX-11 Scaffold28_1, whole genome

Gene Summary

Adenine Count

713487 bp

Thymine Count

699833 bp

Guanine Count

987754 bp

Cytosine Count

1020449 bp

Genome Length

3421523 bp

Protein-coding Genes

3154 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
manganese abc transporter atp-binding proteinDI396_09845Not AvailablePositive2080550 - 208141930473.9
zinc abc transporter permeaseDI396_09850Not AvailablePositive2081421 - 208263541634.9
zinc abc transporter permeaseDI396_09855Not AvailablePositive2082632 - 208356132048.1
2-dehydro-3-deoxygalactonokinaseDI396_09860Not AvailableNegative2083646 - 208442826858.9
sodium-independent anion transporterDI396_09865Not AvailableNegative2084558 - 208631261653.4
5-oxoprolinaseDI396_09870Not AvailablePositive2086629 - 2090255127730.0
heavy metal translocating p-type atpaseDI396_09875Not AvailablePositive2090501 - 209298184249.4
cu(i)-responsive transcriptional regulatorDI396_09880Not AvailablePositive2092978 - 209337914488.4
type i glyceraldehyde-3-phosphate dehydrogenaseDI396_09885Not AvailableNegative2093446 - 209447135837.6
duf1513 domain-containing proteinDI396_09890Not AvailableNegative2094633 - 209570937781.1

Displaying genes 1961 – 1970 of 3230 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.